| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2022 |
|---|
| Symbol | |
|---|
| ID | 6286883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2128665 |
|---|
| End bp | 2129378 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642625591 |
|---|
| Product | phosphate uptake regulator, PhoU |
|---|
| Protein accession | YP_001899588 |
|---|
| Protein GI | 187929101 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0704] Phosphate uptake regulator |
|---|
| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.190943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA AACATCTGTC ATCGCAGTTT GACACCGACC TGACCTCGAT CAGCACCAAG
GTGCTGCAGA TGGGCGGTCT GGTGGAAGCG CAGATTGCCC GCGCGATGCG CGCGCTGGCC
AACTTCGACA CCGCGATGTG TGATCAGGTG CTCGCGGTGG AGCAGGAGAT CAATGCGCTC
GAGATCGAGA TCGACGGCGA CTGCAACAAC ATCATTGCGC GCCGCCAGCC GACCGCCCGC
GACTTGCGTC TGGTCATGGC TATCTCGAAG ACCATCACCA ATCTGGAGCG CGCCGGCGAC
GAGGCCGCGA AGATTGCGAA GCGCACCAAA CGCCTCATGC AGGACCCGTC CGCACACGCG
CTGAACTACG CTGGCGTCGA ACGCTCGGGC GAGATGGCCG CAACCATCCT GCGCCACGCG
CTCGACGCCT TCGCGCGCCT GGACATCACT GCCGCCGTAT CGATCCTGCA GGAAGACAAG
GCCATCGATG AGGAATTCCG CGGCTTCATG CGCGAACTCA TCACGTACAT GATGGAGAAC
CCGCGCACGA TTTCGGTGGC GCTGGATCTG CTGTTCATTG CCAAGGCCAT CGAACGTATC
GGCGATCATG CCAAGAACAT CGCCGAGTTT ATTATCTACA TCGTCAAGGG AACCGACGTC
CGGCATGCCG GGCGCGAGGC GCTGGAGCGC GAGATCCTGG GCGAAGGCGA ATAA
|
|---|
| Protein sequence | MSEKHLSSQF DTDLTSISTK VLQMGGLVEA QIARAMRALA NFDTAMCDQV LAVEQEINAL
EIEIDGDCNN IIARRQPTAR DLRLVMAISK TITNLERAGD EAAKIAKRTK RLMQDPSAHA
LNYAGVERSG EMAATILRHA LDAFARLDIT AAVSILQEDK AIDEEFRGFM RELITYMMEN
PRTISVALDL LFIAKAIERI GDHAKNIAEF IIYIVKGTDV RHAGREALER EILGEGE
|
|---|
| |