Gene Rpic_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2008 
Symbol 
ID6286532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2114820 
End bp2116055 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content68% 
IMG OID642625576 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001899574 
Protein GI187929087 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.584547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCT TCACGCCCCT CGTTCTGCCC AACGGCGCGG TGATCCCAAA TCGCCTTGCC 
AAAGCCGCCA TGGAAGAAAA CATGGCCGAT GCCGATCACG CGCCTTCCGA CGCGTTGCTG
CGCCTGTATG AGGCGTGGGC GGCAGGTGGC GCGGGCTTGA TCCTGACCGG CAACGTGATG
ATCGACCACC GCGCCATGAC CGGCCCGAAC GGCGTCGTCC TCGAAGACGG CGCGCATCTC
GAGCGCTTCC GCCGCTGGGC CCAGGTGGCG CGTGCGCACG GCGCGCATGC GTGGGTGCAG
ATCAACCATC CGGGGCGCCA GATGCCGGCA TCGCTCGGGC AGCCGACGCT GGCGCCGTCG
GCAGTTCCGC TGGCGTTGGG CGCGCTGTCC AAGCAGTTTC CGGTGCCGCG CGAGATGACC
GAGGTGGATA TCGGCGAAGT CCAGCAGCGC TTCACGCGCA GCGCGCAACT GGCCGAGCAG
AGCGGCTTTA CCGGCGTGCA GATCCACGCC GCCCATGGCT ATCTGCTGAG CCAGTTTCTG
TCGCCCATTT CCAACCGGCG GCAGGATCAG TGGGGCGGCC CGATCGAAAA CCGTGCGCGC
CTGCTGCTCG ATATCGTGCG CAGCGTGCGT GCCGCCGTGT CGCCGCAGTT CGTGGTGGCG
GTCAAGCTGA ACTCGGCCGA TTTCCAGCGC GGCGGCTTCA GCCCTGACGA TGCGAAGCAG
GTGGTCGAGC TGCTCAACCC GCTGGGCGTC GATCTGGTCG AACTGTCCGG CGGCAGCTAT
GAAGTGCCTG CCATGCAAGG GCACGCGCGC GACGGCCGCA CGCTTGCCCG CGAAGCGTAT
TTCCTGGAAT TTGCGCGCGA CATTGCCGCC ATCGCACGCA TGCCGCTGAT GGTCACGGGC
GGCATCCGGC GTCGGGCGGT GGCGGAGCAG GTGGTCGACA GCGGTGTCGA TATGGTGGGC
ATTGCGACTG CGCTGTCCAT CGAACCAAAC CTGCCGCGCG ACTGGGCTGG CGGCAAGAAC
AACGCGCCCG CGCTGCAGAC CATCACGTGG AAGAACAAGG CGCTGGGCGC ACTGGCCAAC
ATGGCGGTCG TCAAGTTTCA GCTCAACCGG CTGAGCGAGG GGCGCACGAC GGACCCGCGC
GTGTCGCCGC TGCGCGCGCT GATTCAGCAG CAACTGGCCG CAGCGTGCCA GTCGCGGCGC
TATCGTCGAT GGACGGCGCA ACGCCAGGCG CGCTAG
 
Protein sequence
MKLFTPLVLP NGAVIPNRLA KAAMEENMAD ADHAPSDALL RLYEAWAAGG AGLILTGNVM 
IDHRAMTGPN GVVLEDGAHL ERFRRWAQVA RAHGAHAWVQ INHPGRQMPA SLGQPTLAPS
AVPLALGALS KQFPVPREMT EVDIGEVQQR FTRSAQLAEQ SGFTGVQIHA AHGYLLSQFL
SPISNRRQDQ WGGPIENRAR LLLDIVRSVR AAVSPQFVVA VKLNSADFQR GGFSPDDAKQ
VVELLNPLGV DLVELSGGSY EVPAMQGHAR DGRTLAREAY FLEFARDIAA IARMPLMVTG
GIRRRAVAEQ VVDSGVDMVG IATALSIEPN LPRDWAGGKN NAPALQTITW KNKALGALAN
MAVVKFQLNR LSEGRTTDPR VSPLRALIQQ QLAAACQSRR YRRWTAQRQA R