Gene Rpic_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1986 
Symbol 
ID6289808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2095017 
End bp2096702 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content63% 
IMG OID642625554 
ProductElectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_001899553 
Protein GI187929066 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGC AGCAGCTCCT CGAACAATAC GGCCCGCGAG AGTCCATGGA GTATGACGTC 
GTTATCGTCG GCGGCGGCCC CGCCGGCCTG GCGACTGCGA TTCGCGTCAA GCAACTGGCT
GCCGAGACGG GCAAGGACGT GTCCGTCGTC GTGCTGGAAA AGGGTTCCGA GCCGGGTGCA
CACATTCTTT CGGGCGCTGT GATGGACCCG CGCGCCATCA ACGAACTCCT CCCGAACTGG
AAGGCCGACG GCGCCCCGCT CAACCAGGCG GTCACCGGCG ACGATGTGCT CTTCCTGAGC
GAAACCGGCT CCAAGCGTAC GCCCGACTGG CTCGTGCCGC GCAACTTCCA TAACCACGGC
TGCTACGTGA TCTCGCTGTC GAACGTGGTC AAGTGGATGG CCACGCAGGC CGAAGCGCTG
GGCGTCGAGA TTTTCCCGGG CTTTGCGGCA GCCGAAGTGC TGTATGACGA CAATGGTGCC
GTGCGCGGCG TTGCCACCGG CAACATGGGC ATCGGCAAGG ACGGTGAGCC GACCGAGAAC
TTCCAGCTCG GCATGGAGCT GCTCGGCAAG TACACCATCT TCGCGGAAGG CGCGCGCGGG
CATCTCGGCC GCCAGTTGCT GGAGAAGTTC AAGCTCAACG CCGGCAAGGA CCCGCAGACC
TTCGCCATCG GTATCAAGGA ACTCTGGGAA ATCGATCCGG CCAAGGCCAA GCCCGGCCTC
GTGGTGCACA CCGCGGGCTG GCCGATGGAA GATGACACCT TCGGCGGCGG CTTCCTGTAT
CACCTGGAAG ACAACAAGAT CACGCTCGGC TTCGTGATTG GGCTGGACTA CAAGAACCCT
TGGATGAGCC CGTTCGAAGA GATGCAGCGC TGGAAGGCCC ACCCCGCCAT CCGCGCGCAC
ATCGAAGGCG GGAAGCGCAT CGGCTACGGT GCACGCGCCA TCAACAACGG CACGCCGCAG
GCGCTGCCGA AAACGGTGTT CCCAGGCGGC GCCCTGGTCG GTTGCGATGC AGGCTACCTG
AACGCGGCGC GTATCAAGGG CAGCCACGCG GCCATTAAGA GCGGCATGAT GTGCGGTGAA
GCCGTGTTCG AAGCCGTGAC CGCTGGCCGC TGCGCAGACG AGTTGTCGGC CTACCCCGCC
GCCTTCGAAC AGAGCTGGCT GAAGGAAGAA CTGGACCAGT CGCGCAACTT CAAGCTGTGG
TTCAAGAAGA GCCCGACACT GGGCAAGATC ATGACCGGCA TCGAACAGTG GCTGCTGCCC
AAGATTGGCG TCAGCAACCC ACCTTGGACG CTGCACGGCA CGAAGTCGGA CAACCAGTCG
CTCAAGCCGG CATCGGAATG CCCGAAGATC GAGTATCCGA AGCCGGACGG CAAGGTCACG
TTCGATCGCC TGTCGTCGGT GTTCATCTCG AACACGAACC ACGAAGAGAA CCAGCCGGCT
CACCTGACGC TGAAGGATCC GACCGTTCCG ACGCGCATCA ACCTGACGCA GTTTGCCGGC
CCCGAGCAGC GCTACTGCCC GGCTGGCGTG TATGAGTTCG TCAAGAACGA TGAGGGCACT
GAGCGCCTGC AGATCAACGC GCAGAACTGC GTGCACTGCA AGACCTGCGA CATCAAGGAC
CCGACGCAGA ACATTGTGTG GGTCACCCCG GAAGGCGGTG GCGGGCCGAA CTACGTCGGC
ATGTAA
 
Protein sequence
MNQQQLLEQY GPRESMEYDV VIVGGGPAGL ATAIRVKQLA AETGKDVSVV VLEKGSEPGA 
HILSGAVMDP RAINELLPNW KADGAPLNQA VTGDDVLFLS ETGSKRTPDW LVPRNFHNHG
CYVISLSNVV KWMATQAEAL GVEIFPGFAA AEVLYDDNGA VRGVATGNMG IGKDGEPTEN
FQLGMELLGK YTIFAEGARG HLGRQLLEKF KLNAGKDPQT FAIGIKELWE IDPAKAKPGL
VVHTAGWPME DDTFGGGFLY HLEDNKITLG FVIGLDYKNP WMSPFEEMQR WKAHPAIRAH
IEGGKRIGYG ARAINNGTPQ ALPKTVFPGG ALVGCDAGYL NAARIKGSHA AIKSGMMCGE
AVFEAVTAGR CADELSAYPA AFEQSWLKEE LDQSRNFKLW FKKSPTLGKI MTGIEQWLLP
KIGVSNPPWT LHGTKSDNQS LKPASECPKI EYPKPDGKVT FDRLSSVFIS NTNHEENQPA
HLTLKDPTVP TRINLTQFAG PEQRYCPAGV YEFVKNDEGT ERLQINAQNC VHCKTCDIKD
PTQNIVWVTP EGGGGPNYVG M