Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1982 |
Symbol | |
ID | 6286948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2091961 |
End bp | 2092596 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642625550 |
Product | 3-oxoacid CoA-transferase, B subunit |
Protein accession | YP_001899549 |
Protein GI | 187929062 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTGGA CACAAGACCA AATGGCGGCG CGCGCTGCCC AGGAGTTGCA AGACGGTTTC TACGTCAACC TCGGCATCGG TATCCCGACG CTGGTTGCCA ACCACACCGG CGACAAGGAA GTCTGGCTGC AAAGCGAAAA CGGCATGCTG GGCATCGGTC CGTTTCCCAT GGAAGACGAA GTGGATGCCG ACCTGATCAA CGCAGGCAAG CAGACCGTGA CCACGCTGCC CGGCAGCGCC ATCTTCGGCA GCGATCAGAG CTTTGCGATG ATTCGCGGCG GCAAGATCAA CCTGTCGATT CTCGGTGCGA TGCAGGTGAG CGAGACGGGC GACCTGGCCA ACTGGATGAT CCCCGGCAAG ATGGTCAAGG GCATGGGTGG CGCGATGGAC CTCGTGGCCG GCGTCAAGCG GGTGATCGTT CTGATGGAAC ACACCGCCAA GAAAAAGGAC GGCACCGAAG ACATGAAGAT CCTGCCCAAG TGCACGTTGC CGCTGACGGG TGTGGGCGTG GTGGATCGCA TCATTACGGA CCTCGGCGTG ATCGACGTGA CCGAGCAGGG ACTGAAGCTG ATCGAAACCG CGCCGGGCGT TTCCCGCGAA GAGATCCAGG CCAAGACTGG CGTCAACCTG TTGTAA
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Protein sequence | MAWTQDQMAA RAAQELQDGF YVNLGIGIPT LVANHTGDKE VWLQSENGML GIGPFPMEDE VDADLINAGK QTVTTLPGSA IFGSDQSFAM IRGGKINLSI LGAMQVSETG DLANWMIPGK MVKGMGGAMD LVAGVKRVIV LMEHTAKKKD GTEDMKILPK CTLPLTGVGV VDRIITDLGV IDVTEQGLKL IETAPGVSRE EIQAKTGVNL L
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