Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1981 |
Symbol | |
ID | 6286947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2091159 |
End bp | 2091938 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642625549 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001899548 |
Protein GI | 187929061 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAAG GAAAAACCGC CCTCGTCACG GGCTCGACCA GCGGGATTGG TCTGGGTATT GCCTGTTCGC TGGCCGCGCA GGGCGCCAAC ATCATCATGA ATGGCTTTGG CGATGTGGAA GCACCCAAGG CGCAGATCGC GGCCGCGGGC AAAAATGCCA TCCGCATCGG ATATCACGGC GCCGACATGA GCAAGCCAGC CGAGATCGAA GCGATGTTCG CCTATGCCGA CGCAGAGTTT GGCGGCGTGG ACATCCTCGT CAACAACGCC GGCATCCAGT ATGTGGCCAA TGTCGAGGAT TTCCCGACCG AACGCTGGGA CGCCATCATC GCCATCAACC TCACCTCGGC TTTCCACACG ACGCGGCTTG CTGTGCCGGG CATGAAGCGC AAGAACTGGG GCCGCATCAT CAACGTCGCA TCGGTGCATG GGTTGGTGGC ATCGGCGCAG AAATCGGCGT ACGTGGCGGC CAAACACGGT ATCGTCGGCT TCACCAAATC GGTGGCGCTG GAGACCGCAC AGACGGGCAT CACGTCCAAC GCGATCTGCC CGGGCTGGGT GCTGACGCCG CTGGTGCAGA AGCAGATCGA TGCGCGCGCC GAGAAGGATG GCCTGTCCGC GCTCGAAGCC AAGACAGATC TGCTGATGGA AAAGCAGCCT TCGCGTGAGT TCGTGACGCC CGATCAGCTT GGCGCGCTGG CGGTGTTTCT GTGCAGCGAC GCGGCGGAGC AGGTGCGCGG CGTGGCGTGG AACATGGATG GTGGCTGGGT GGCGCAGTAA
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Protein sequence | MLQGKTALVT GSTSGIGLGI ACSLAAQGAN IIMNGFGDVE APKAQIAAAG KNAIRIGYHG ADMSKPAEIE AMFAYADAEF GGVDILVNNA GIQYVANVED FPTERWDAII AINLTSAFHT TRLAVPGMKR KNWGRIINVA SVHGLVASAQ KSAYVAAKHG IVGFTKSVAL ETAQTGITSN AICPGWVLTP LVQKQIDARA EKDGLSALEA KTDLLMEKQP SREFVTPDQL GALAVFLCSD AAEQVRGVAW NMDGGWVAQ
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