Gene Rpic_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1915 
Symbol 
ID6288520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2019908 
End bp2021089 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content66% 
IMG OID642625479 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001899482 
Protein GI187928995 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0319596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG TTGTGATCGT ATCGGCGGTA CGCACCGCCG TGGGCAAGTT TGGTGGCTCG 
CTGGCGAAGA TCGCTGCGCC TGAGCTTGGC GCGGCCGTTA TCCGTGAAGC GCTGGCGCGC
GCCAAGGTGG CGCCGGACCA GGTGAGCGAA GTCATCATGG GCCAGGTGCT GACGGCAGGC
TCGGGTCAGA ACCCGGCGCG CCAGGCCGTC ATCAAGGCTG GGCTGCCGAA CATGGTGCCT
GGCCTGACCA TCAACAAGGT GTGCGGCTCG GGCCTGAAGG CCGTGATGCT GGCCGCCAAC
GCCATCATCG CGGGCGATGC CGAGATCGTC GTGGCTGGCG GCCAGGAAAA CATGTCCGCC
GCGCCGCACG TCCTGCCAGG CTCGCGCGAC GGTTTCCGCA TGGGCGACGC CAAGCTGATC
GATTCGATGA TTGTGGATGG GCTATGGGAC GTCTACAACC AGTACCACAT GGGCATCACG
GCCGAGAACG TCGCCAAGGA ATACGGCATC ACGCGTGAAG CGCAGGACGA GTTTGCCGTG
GCTTCGCAGA ACAAGGCGGA AGCTGCGCAG AAGTCGGGCC GCTTCAATGA CGAAATCGTT
CCGATCCTGA TCCCGCAGCG CAAGGGCGAT CCGATTGCCT TCTCGCAGGA CGAGTTCGTT
CGCCATGGTG CCACGCTCGA GTCGATGGCT GGCCTGAAGC CCGCCTTCGA CAAGGCAGGT
ACGGTGACGG CGGCCAACGC CTCGGGCCTG AACGATGGCG CCGCCGCAGT CGTGGTGATG
TCGGCCGCCA AGGCCAAGGA ACTGGGCCTG ACGCCACTGG CCACCATCCG TGCTTACGCG
AGCGCCGGCC TGGACCCGAA GGTCATGGGC ATGGGGCCGG TGCCGGCATC CAAACGCTGC
CTGTCGCGCG CCGGCTGGTC GGTGGGCGAC CTGGACCTGA TGGAGATCAA CGAGGCGTTC
GCCGCTCAGG CGCTGGCCGT GCATCAGCAG ATGGGCTGGG ACACGTCCAA GATCAACGTC
AACGGCGGTG CGATTGCGAT CGGTCACCCG ATCGGCGCGT CGGGCTGCCG CATCCTGGTC
ACGCTGCTGC ACGAAATGCA GAAGCGCGAT GCGAAGAAGG GCCTGGCTTC GCTGTGTATC
GGCGGTGGCA TGGGCGTGGC GCTGGCCGTT GAGCGCCCGT AA
 
Protein sequence
MTDVVIVSAV RTAVGKFGGS LAKIAAPELG AAVIREALAR AKVAPDQVSE VIMGQVLTAG 
SGQNPARQAV IKAGLPNMVP GLTINKVCGS GLKAVMLAAN AIIAGDAEIV VAGGQENMSA
APHVLPGSRD GFRMGDAKLI DSMIVDGLWD VYNQYHMGIT AENVAKEYGI TREAQDEFAV
ASQNKAEAAQ KSGRFNDEIV PILIPQRKGD PIAFSQDEFV RHGATLESMA GLKPAFDKAG
TVTAANASGL NDGAAAVVVM SAAKAKELGL TPLATIRAYA SAGLDPKVMG MGPVPASKRC
LSRAGWSVGD LDLMEINEAF AAQALAVHQQ MGWDTSKINV NGGAIAIGHP IGASGCRILV
TLLHEMQKRD AKKGLASLCI GGGMGVALAV ERP