Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1895 |
Symbol | |
ID | 6289662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1996850 |
End bp | 1998034 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642625459 |
Product | protein of unknown function DUF1501 |
Protein accession | YP_001899462 |
Protein GI | 187928975 |
COG category | [S] Function unknown |
COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.213344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.16671 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACGTC GCAATTTTCT GAAGGCCGGC GCCATGCTCG GCATGGGTGG CGCGGTGCCG GGGATTGTCT TTGCGCAAGG GCAAGACAAG CGCAAGGGCT ACGGCAACCT GCTCATCCTC ATCGAACTCA AGGGCGGCAA TGACGGGCTG AACACCGTGG TGCCCTACAC GAGCGCACAG TACTATGCGC TGCGCCCGCG CATCGCCATC AAGCGGGAGC AGGTGCTGCA ACTGGATGAC CGCTACGGCC TGCATCCGTC TTTGCAGGCG ATGATGCCGC TGTGGCAGGC GGGGGAATTG TCGGTGGTGC AGGGGCTGTC ATATCCGCAG CCGAATCTTT CGCACTTCCG CTCGATCGAG ATCTGGGACA CGGCGTCGCG CTCCGACCAA TACCTGCGCG AAGGCTGGTT GACGCGTGCG TTTGCCGCAC AGCCGGTGCC GCCATCGTTC GGTGCAGATG GCGTAATCAT TGGCAGCGCC GATCTTGGCC CGCTCGACGG CGGCGCACGT GCCGTAGCGC TCGCCAATCC CGATGCGTTC CTCAACGAAG CCAAGCTGGC GATGCCTTCG CACGCGATGG GCAACGCCAC ACTCGCGCAC GTGCTGAAGG TCGAGGCTGA TATCGTCAAG GCGGCCGACG GACTGCGTCC GAAGTCCGGC AAGTTCGCGT TCCAGACGCA TTTTCCGGAC GGCGGGTTCG GTAACTCGAT CAAGGCGGCG ATGCAGGTGG TGGCAGCACC GGGCCGTGGC GGTGCGGACG TCGCCGTGGT GTGCCTGTCG CTCGGTAGCT TTGATACGCA TACCAATCAG CAAGGCACGC AGGCGAACCT GCTGCGGCAG TTGGGCGAGG GCATCGCTTC GCTCAAGAGC GCGTTGACCG AGTTGGGCCG CTGGAACGAC ACGCTGATCG TCACGTATTC GGAGTTTGGC CGCCGCCCGC GCGAAAACAT GAACAACGGT ACGGATCACG GCACGGCTGC CGCGCATTTC GTGGCCGGTG GCCGCGTCAA GGGCGGGCTG GCCGGGCAGG GGCCGGTGCT GGAACGCCTG GACGGCGGCG GCAATCTCGA CCCGTCGGTC GATTTCCGCT CGCTTTATGC CACGGTGCTG GAGCGCTGGT GGGGGATGGA TTCGCAGCCG GTGCTGGCAG GGCGGTTTGC GCCGCTGGAT CTGATCAAAG CCTGA
|
Protein sequence | MERRNFLKAG AMLGMGGAVP GIVFAQGQDK RKGYGNLLIL IELKGGNDGL NTVVPYTSAQ YYALRPRIAI KREQVLQLDD RYGLHPSLQA MMPLWQAGEL SVVQGLSYPQ PNLSHFRSIE IWDTASRSDQ YLREGWLTRA FAAQPVPPSF GADGVIIGSA DLGPLDGGAR AVALANPDAF LNEAKLAMPS HAMGNATLAH VLKVEADIVK AADGLRPKSG KFAFQTHFPD GGFGNSIKAA MQVVAAPGRG GADVAVVCLS LGSFDTHTNQ QGTQANLLRQ LGEGIASLKS ALTELGRWND TLIVTYSEFG RRPRENMNNG TDHGTAAAHF VAGGRVKGGL AGQGPVLERL DGGGNLDPSV DFRSLYATVL ERWWGMDSQP VLAGRFAPLD LIKA
|
| |