Gene Rpic_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1895 
Symbol 
ID6289662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1996850 
End bp1998034 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content65% 
IMG OID642625459 
Productprotein of unknown function DUF1501 
Protein accessionYP_001899462 
Protein GI187928975 
COG category[S] Function unknown 
COG ID[COG4102] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.213344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.16671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTC GCAATTTTCT GAAGGCCGGC GCCATGCTCG GCATGGGTGG CGCGGTGCCG 
GGGATTGTCT TTGCGCAAGG GCAAGACAAG CGCAAGGGCT ACGGCAACCT GCTCATCCTC
ATCGAACTCA AGGGCGGCAA TGACGGGCTG AACACCGTGG TGCCCTACAC GAGCGCACAG
TACTATGCGC TGCGCCCGCG CATCGCCATC AAGCGGGAGC AGGTGCTGCA ACTGGATGAC
CGCTACGGCC TGCATCCGTC TTTGCAGGCG ATGATGCCGC TGTGGCAGGC GGGGGAATTG
TCGGTGGTGC AGGGGCTGTC ATATCCGCAG CCGAATCTTT CGCACTTCCG CTCGATCGAG
ATCTGGGACA CGGCGTCGCG CTCCGACCAA TACCTGCGCG AAGGCTGGTT GACGCGTGCG
TTTGCCGCAC AGCCGGTGCC GCCATCGTTC GGTGCAGATG GCGTAATCAT TGGCAGCGCC
GATCTTGGCC CGCTCGACGG CGGCGCACGT GCCGTAGCGC TCGCCAATCC CGATGCGTTC
CTCAACGAAG CCAAGCTGGC GATGCCTTCG CACGCGATGG GCAACGCCAC ACTCGCGCAC
GTGCTGAAGG TCGAGGCTGA TATCGTCAAG GCGGCCGACG GACTGCGTCC GAAGTCCGGC
AAGTTCGCGT TCCAGACGCA TTTTCCGGAC GGCGGGTTCG GTAACTCGAT CAAGGCGGCG
ATGCAGGTGG TGGCAGCACC GGGCCGTGGC GGTGCGGACG TCGCCGTGGT GTGCCTGTCG
CTCGGTAGCT TTGATACGCA TACCAATCAG CAAGGCACGC AGGCGAACCT GCTGCGGCAG
TTGGGCGAGG GCATCGCTTC GCTCAAGAGC GCGTTGACCG AGTTGGGCCG CTGGAACGAC
ACGCTGATCG TCACGTATTC GGAGTTTGGC CGCCGCCCGC GCGAAAACAT GAACAACGGT
ACGGATCACG GCACGGCTGC CGCGCATTTC GTGGCCGGTG GCCGCGTCAA GGGCGGGCTG
GCCGGGCAGG GGCCGGTGCT GGAACGCCTG GACGGCGGCG GCAATCTCGA CCCGTCGGTC
GATTTCCGCT CGCTTTATGC CACGGTGCTG GAGCGCTGGT GGGGGATGGA TTCGCAGCCG
GTGCTGGCAG GGCGGTTTGC GCCGCTGGAT CTGATCAAAG CCTGA
 
Protein sequence
MERRNFLKAG AMLGMGGAVP GIVFAQGQDK RKGYGNLLIL IELKGGNDGL NTVVPYTSAQ 
YYALRPRIAI KREQVLQLDD RYGLHPSLQA MMPLWQAGEL SVVQGLSYPQ PNLSHFRSIE
IWDTASRSDQ YLREGWLTRA FAAQPVPPSF GADGVIIGSA DLGPLDGGAR AVALANPDAF
LNEAKLAMPS HAMGNATLAH VLKVEADIVK AADGLRPKSG KFAFQTHFPD GGFGNSIKAA
MQVVAAPGRG GADVAVVCLS LGSFDTHTNQ QGTQANLLRQ LGEGIASLKS ALTELGRWND
TLIVTYSEFG RRPRENMNNG TDHGTAAAHF VAGGRVKGGL AGQGPVLERL DGGGNLDPSV
DFRSLYATVL ERWWGMDSQP VLAGRFAPLD LIKA