Gene Rpic_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1887 
Symbol 
ID6288379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1986885 
End bp1987445 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content64% 
IMG OID642625451 
ProductFMN-binding domain protein 
Protein accessionYP_001899455 
Protein GI187928968 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00905192 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.670131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTACC AGCCAGTGCC CATTGTTCTT GTCTGTGCCG CCGCCGTGGG GGCGCCGGGC 
ATGATTGTCA CCAAGGCGTT TGCGGCGGAC TACCTGTCCG CTGCCGAGGC CCAGAAGGCA
ATGTTTCCCG GCGCCACAGG CTTTGAGCCG GTGTCGCTCA CGCTCTCAGC CGACCAGCTC
AAGCAGTTGG CCGAGCGTGC GGGCGGCCCG GCCAAGCCGG GTGCGTGGCG CGCATGGCAA
GCCAAGCAAG GTGATAAGAC GCTCGGCTAC TTCGTGACCG ACGCCGTCAT CGGCAAATTC
GAGCTCATCA ACTACGCCGT GGCCCTGAAC ACCGCCGGCG AGATCAGTGG CGTGGAAATC
CTTACCTACC GAGAAAGCCA CGGCTACGAA GTCCGCAACA AGCCGTGGCG CGCACAGTTT
CTGGGCAAGT CGGCCAAGTC GGCGCTGCGT GTGGGCGATG ACATCAACAA CATCAGCGGA
GCAACGTTGT CGTGCACGCA TCTCACCGAT GGCATCCGGC GCATTGCGGT GATGGCGCAG
TTGGCGCTCG TCCAGCGCTG A
 
Protein sequence
MRYQPVPIVL VCAAAVGAPG MIVTKAFAAD YLSAAEAQKA MFPGATGFEP VSLTLSADQL 
KQLAERAGGP AKPGAWRAWQ AKQGDKTLGY FVTDAVIGKF ELINYAVALN TAGEISGVEI
LTYRESHGYE VRNKPWRAQF LGKSAKSALR VGDDINNISG ATLSCTHLTD GIRRIAVMAQ
LALVQR