| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1876 |
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| Symbol | |
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| ID | 6288034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1976153 |
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| End bp | 1978156 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642625440 |
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| Product | cytochrome o ubiquinol oxidase, subunit I |
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| Protein accession | YP_001899444 |
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| Protein GI | 187928957 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.178769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.179376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGC GTTCTGAACT CGCCAACATG ATTTTTGGCC GCCTGACGTG GGAGGCCATT
CCGTATCACG AGCCGATCCT GCTCGCCACC TTCGCGGTCG TCGCGCTGGT CGGCCTCGTG
CTGGTCGGTG CGCTGACGTA CTTCCGCCTC TGGGGCTACC TCTGGCGTGA ATGGTTCACC
AGCATCGACC ACAAGAAGAT CGGCATCATG TACGTCGTGC TGGGCATCGT GATGCTGCTG
CGCGGCTTTG CCGATGCCGT CATGATGCGG ATACAGCAGG CGGTGGCCTT CGGCGACAAC
CTGGGCTACC TGCCGCCGCA CCACTACGAC CAGATATTCA CCGCGCACGG TGTGATCATG
ATCTTCTTCG TCGCCATGCC GCTGGTGACC GGGCTCATGA ACTTTGTCAT GCCGCTGCAG
ATCGGCGCGC GCGACGTGGC CTTCCCGTTC CTCAACAACT TCAGTTTCTG GATGACCACC
GGCGGCGCCA TCCTGGTGAT GATGTCGCTG TTCGTGGGCG AGTTCGCACG TACCGGATGG
CTGGCGTATC CGCCGCTGTC GGGCATCCTT GCAAGCCCAG ATGTGGGCGT CGACTACTAC
ATATGGGCAT TGCAGATAGC GGGGGTTGGT ACCGTGCTAT CGGGCATCAA CTTGCTGGTC
ACCATCGTCA AGATGCGCGC GCCCGGCATG ACGTTGATGC GCATGCCGAT CTTCACCTGG
ACGGCGCTGT GCACGAACAC GCTGATCGTT GCCGCCTTTC CGGTGTTGAC GGCCGCAGTG
ACGCTGCTTG CCCTGGACCG TTACCTTGGC ACCCATTTCT TTACGGTCGA GCAGGGCGGT
AGCGCGATGA TGTATGTGAA CCTGATCTGG ATCTGGGGCC ACCCCGAGGT CTACATCCTG
GTGCTGCCCG CGTTCGGCAT CTTCTCGGAA GTGGTGGCCA CGTATTCACG CAAGCGCCTG
TTCGGCTACG CATCGATGGT GTACGCCACG GTCGTGATTA CCGTGCTGTC GTACCTCGTC
TGGCTCCACC ACTTCTTCAC CATGGGCTCC GGCGCCAGCG TCAACTCGTT CTTCGGGATC
ACGACGATGA TCATCTCGAT CCCGACAGGC GCCAAGATCT TCAATTGGCT GTTCACGATG
TACCACGGCA AGATCCGCTT CGAGCCGCCC ATGCTGTGGA CGATCGGGTT CATGGTGACG
TTTGTCATTG GCGGCATGAC AGGCGTGTTG TTGGCGGTGC CGCCGGCGGA TTTCTCGCTG
CACAACAGCC TGTTCCTGAT CGCGCATTTT CATAACGTGA TCATCGGCGG CGTGTTGTTT
GGCCTCATGG CCGGCATTAC GTACTGGTTC CCCAAGGCGT TTGGCTACCG CCTCGTGTCG
TCGTGGGGCA AGGCGTCGTT CTGGTTCTGG TTTGTCGGCT TCTACATCGC GTTCATGCCG
TTGTACTGGC TGGGCATGCT TGGGGTCACA CGCCGCATGA ACCATTTCGA CGATCCGTCC
TTGCAGATCT GGTTCCAGAT TGCCGCATTG GGCGCCTTGC TGATCGCCAT CGGCATTGCC
TGCTTCCTGA TCCAGCTGGT GGTCAGCTTC CTCCGTCGGG AAGAACTGCG CGACACGACC
GGCGACCCGT GGAACGGCCG CACGTTGGAA TGGTCCACTT CGTCGCCGCC GCCGCAGTAC
AACTTCGCAA TGACGCCGCT CGTACATGAC GCCGACGCCT GGTGGCAGAT GAAGCAGTAC
GGCTACCGGC GGCCGCAGGA AGGCTTCAAG CCGATTCACA TGCCCAAGGG CACCGCTGCC
GGCATCGTGC TGGCGGGGCT CTCGACGCTG TGCGGCTTTG CGCTGATCTG GCATATCTGG
TGGCTGGCCA TCGTGTCGTT CGCGGCCACG ATCCTCTCGG CGATCATTCA TACCTTCAAC
TACAAGCGCG ACTACTACAT TCCGGCGGAA GAGGTGATCC GCACCGAAGC ATCGCGCACG
CAACTGATGG CAGGCCATGG CTGA
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| Protein sequence | MPERSELANM IFGRLTWEAI PYHEPILLAT FAVVALVGLV LVGALTYFRL WGYLWREWFT
SIDHKKIGIM YVVLGIVMLL RGFADAVMMR IQQAVAFGDN LGYLPPHHYD QIFTAHGVIM
IFFVAMPLVT GLMNFVMPLQ IGARDVAFPF LNNFSFWMTT GGAILVMMSL FVGEFARTGW
LAYPPLSGIL ASPDVGVDYY IWALQIAGVG TVLSGINLLV TIVKMRAPGM TLMRMPIFTW
TALCTNTLIV AAFPVLTAAV TLLALDRYLG THFFTVEQGG SAMMYVNLIW IWGHPEVYIL
VLPAFGIFSE VVATYSRKRL FGYASMVYAT VVITVLSYLV WLHHFFTMGS GASVNSFFGI
TTMIISIPTG AKIFNWLFTM YHGKIRFEPP MLWTIGFMVT FVIGGMTGVL LAVPPADFSL
HNSLFLIAHF HNVIIGGVLF GLMAGITYWF PKAFGYRLVS SWGKASFWFW FVGFYIAFMP
LYWLGMLGVT RRMNHFDDPS LQIWFQIAAL GALLIAIGIA CFLIQLVVSF LRREELRDTT
GDPWNGRTLE WSTSSPPPQY NFAMTPLVHD ADAWWQMKQY GYRRPQEGFK PIHMPKGTAA
GIVLAGLSTL CGFALIWHIW WLAIVSFAAT ILSAIIHTFN YKRDYYIPAE EVIRTEASRT
QLMAGHG
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