Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1870 |
Symbol | tig |
ID | 6288465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1970323 |
End bp | 1971666 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642625434 |
Product | trigger factor |
Protein accession | YP_001899438 |
Protein GI | 187928951 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.359537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0257731 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACTA TCGAAAACCT CGGCAAGCTT GATCGCAAAG TGACCCTGGC TGTCCCGAAG GCCGAAGTGG AGCAAGAGAA GCAAAGCCGT CTGGCGCGTC TGTCCAAGAC CGTCAAGATG TCCGGCTTCC GCCCGGGCAA GGTCCCGATG AAGATGGTCG AGAAGCAATA CGGCCAACAG GTCGAATTCG AGGTGCGCTA CGACAAGGCC GCCCGTCAGT TCTTTGACAT CACCAACGAA CAAGGCGTGA AGGTTGCCGG CCAACCGCGC TTCGAGCTGA AGACCGAAGG CGTGGCCGAT GACCAGGTCG CGTTCGACGC CACCTTCGAG GTGTATCCGG AAGTCAAGCT CGGCGATCTG GCCAGCGCGG AACTGACCCG CACCAAGACC GAAATCACCG ATGCCGAGAT CGACAAGACC CTCGACATCC TGCGCAAGCA ACGCGTGCAC TACCACCCGC GCGGCGAAGC CGGCGAGCAT GGTGACGGCG GTGCAGCCGT TGCCCAGGAC GGCGACCGCG TGACGGTCGA TTTCGTCGGC ACGATTGACG GTGTGGAATT TGCCGGTGGC AAGGCTGAAG GTTTTAGCTT CGTGCTGGGC GAAGGCCGCA TGTTGCCCGA GTTCGAGCAA GCCACGCTGG GCCTGAAGCA AGGCGAGTCG AAGAAATTCC CGCTGGCATT CCCCGAGGAC TACCACGGCA AGGATGTCGC GGGTAAGACG GCTGAATTCA CCGTCACGCT CAAGCAAGTC GAGTGGGCGC ACCTGCCGGA AGTCAACGAA GCGTTTGCCC AATCGCTGGG CATCGCCGAC GGCAACCTGG ACAAGATGCG CGCCGATATC CGCGAGAACC TCGAGCGTGA AGTCAAGCGC CGCACGCACG CGCTGCTCAA GGACCAAGTC ATGGAAGCGC TGCTGAAGGT GGCAGAGCTG GATGTGCCGA AGTCGCTGGT CGAGCAAGAC CAAGAGCGCC TGGTTGAAAT GGCTCGCCGT GACCTCGAAT CGCGCGGCAT GCCGAACGCC AAGAACATGC CGATCCCGGC CGAGATGTTC ACGCAGCAAG CTGAGCGCCG CGTGAAGCTG GGCCTGGTGC TGGCCGAAGT CGTGAAGGCC AACGGCCTGG AAGCAAAGCC GGAGCAGATC AAGGCCGAGA TCGAAGAGTT CGCCAAGAGC TACGAAGATC CGAAGGAAGT CATCCGCTGG TACTACGGCG ACCAACAGCG CCTGGCCGAG ATGGAAGCCT ACGTGCTCGA AAACAACGTG GTAAATTTTG TGTGCGACAA GGCCAAAGTC ACTGACAAGG CCGTGTCGTT CGAAGAGCTG ACTGCCACGC CGGCGCAAGG CTGA
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Protein sequence | MSTIENLGKL DRKVTLAVPK AEVEQEKQSR LARLSKTVKM SGFRPGKVPM KMVEKQYGQQ VEFEVRYDKA ARQFFDITNE QGVKVAGQPR FELKTEGVAD DQVAFDATFE VYPEVKLGDL ASAELTRTKT EITDAEIDKT LDILRKQRVH YHPRGEAGEH GDGGAAVAQD GDRVTVDFVG TIDGVEFAGG KAEGFSFVLG EGRMLPEFEQ ATLGLKQGES KKFPLAFPED YHGKDVAGKT AEFTVTLKQV EWAHLPEVNE AFAQSLGIAD GNLDKMRADI RENLEREVKR RTHALLKDQV MEALLKVAEL DVPKSLVEQD QERLVEMARR DLESRGMPNA KNMPIPAEMF TQQAERRVKL GLVLAEVVKA NGLEAKPEQI KAEIEEFAKS YEDPKEVIRW YYGDQQRLAE MEAYVLENNV VNFVCDKAKV TDKAVSFEEL TATPAQG
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