Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1862 |
Symbol | |
ID | 6287181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1960531 |
End bp | 1961241 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642625424 |
Product | ABC transporter related |
Protein accession | YP_001899430 |
Protein GI | 187928943 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0000203223 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGTCTT CCGCTACCTG GGTGATTGAA GTCGATTCGC TGCACAAGAC CGTGCGCGAT GCCACCGGTG AGTTGCCTAT TCTGAGCGAT GTTGCCTTCC GTGTGGAAAG GGGCGAGACA CTGGCCATTG TTGGCGCTTC CGGCTCGGGC AAATCGACGT TGCTAGGGTT GCTCGCCGGC CTGGACTTGC CGACATCGGG TTCGGTCAAG CTGCTGGGCA ACGACTTGTT CGTCTTGGAT GAGGATGGCC GTGCGGCCGT GCGCGGCAGC CACGTGGGCT TTGTCTTCCA ATCGTTCCAG CTGCTGCCCC ATCTGACGGC GCTTGAGAAC GTGATGTTGC CGCTGGAGTT GCAGGGCGAC GTGAGCACCG CCGAAATGCG GCGTCGCGCA ACGGTTCTGC TGGAGCGCGT TGGCCTGGGT GCGCGGCTGT CGCACTATCC AAAGACGCTT TCGGGCGGCG AACAGCAACG CGTGGCCTTG GCACGTGCGT TTGTGACCGA GCCCGACATT CTCTTTGCCG ATGAACCGAC CGGCAGTCTC GACACCGCCA CGGGCGAGGC CGTGATCGCG CTGATGTTTG AACTCAACCG TAGTGCCGGC TCCACGCTGG TGCTGGTGAC GCACGACCGC TCCGTGGCGG CGCGTTGCAG CCGCATTCTC ACCATCGAAG CAGGGCATCT CGTGGGCGAC GAGGCTGTCA CCGAACTCTG A
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Protein sequence | MSSSATWVIE VDSLHKTVRD ATGELPILSD VAFRVERGET LAIVGASGSG KSTLLGLLAG LDLPTSGSVK LLGNDLFVLD EDGRAAVRGS HVGFVFQSFQ LLPHLTALEN VMLPLELQGD VSTAEMRRRA TVLLERVGLG ARLSHYPKTL SGGEQQRVAL ARAFVTEPDI LFADEPTGSL DTATGEAVIA LMFELNRSAG STLVLVTHDR SVAARCSRIL TIEAGHLVGD EAVTEL
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