Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1819 |
Symbol | |
ID | 6289228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1912724 |
End bp | 1913428 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642625382 |
Product | major intrinsic protein |
Protein accession | YP_001899388 |
Protein GI | 187928901 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.154177 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGATC TGCGCAGCCG GCTTGCCGCC GAAGCACTGG GCACGGCGCT ACTGCTCGCC ATTGTCATCG GGTCCGGCAT CATGGCCGAA CGCCTGGCCG GCGGCAACGT CGCGGTGGCG CTGCTGGCCA ACACGGCGGC CACGGTCGGC GGCCTCTACG TCCTGATCGA GGTCTTCGGG CCGATCAGCG GCGCGCACTT CAATCCGGCC GTCAGCGCGA TCATGGTGGC GCGAGGAGAG CTGCCCGGTT CGGCTCTGGC CCCCTACATT GCTGCACAGC TTGTGGGGGC GCTACTGGGC GCATGGCTGG CGCATGCCAT GTTCGACATG ACGATCCTGC AGTTCTCGAC CAAGGTGCGT AGCGGACCGG GGCAATGGAT TGCCGAAGCG GTGGCAACCG CGGGGCTGCT TCTGGTGATT TTGCGTGCGC CGAACGGTCG CGCCTCTTCC ATGGTGGCGG CCTACATCGG CGCGGCCTAC TGGTTCACGG CCTCCACGTC GTTTGCCAAT CCGGCGGCGG CGTTCGGGCG GATGTTCAGC AACAGTTTCG CCGGCATTGC GCCGGGCAGC GTGCCGGGTT ACGTGCTGGC CGAGTGCACC GGTGCGGCGC TCGGGTTCGC GCTGCACCGG ATGCTGGAGC CGCGCCTGGC GCGTCACGGA CATCCCAATA TCATCGAGTC CTCTGGCGAA CACCCGGCGG ATTGA
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Protein sequence | MVDLRSRLAA EALGTALLLA IVIGSGIMAE RLAGGNVAVA LLANTAATVG GLYVLIEVFG PISGAHFNPA VSAIMVARGE LPGSALAPYI AAQLVGALLG AWLAHAMFDM TILQFSTKVR SGPGQWIAEA VATAGLLLVI LRAPNGRASS MVAAYIGAAY WFTASTSFAN PAAAFGRMFS NSFAGIAPGS VPGYVLAECT GAALGFALHR MLEPRLARHG HPNIIESSGE HPAD
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