Gene Rpic_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1787 
Symbol 
ID6286991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1882384 
End bp1884069 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content69% 
IMG OID642625351 
Productputative mercuric reductase 
Protein accessionYP_001899357 
Protein GI187928870 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
[COG2608] Copper chaperone 
TIGRFAM ID[TIGR02053] mercuric reductase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.152452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.329261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATC TGAAGATCAC TGGAATGACC TGCGATTCGT GTGCCGTCCA CGTCAAGGAT 
GCCTTGGAGA AGGTGCCGGG CGTGCGGTCG GCGGTCGTAT CCTATCCGAA GGGGACGGCG
CAAATCGCTA CCGACCCCGG CACTTCGACG GATGCGCTGA CTGCGGCCGT GGCCGGACTC
GGCTACCGGG TCATGCTCGG TGAGGCCCCG CCAGTGGAAA AACGCGGCAA CCTGCTCGAC
AAGGCGCTGG GCTGGCTTGC CAGCGGTGAG AAATCCGCAG GCGAAGGCAG CGCGCTACGC
ATCGCCGTCA TCGGCAGCGG CGGCGCCGCG ATGGCGGCGG CCCTCAAGGC CGTCGAGCAA
GGCGCGCAGG TCACCCTGAT CGAGCGCGGC ACCATCGGTG GCACCTGCGT CAACGTCGGC
TGCGTGCCGT CCAAGATCAT GATCCGCGCG GCCCATATCG CCCACCTGCG CCGCGAAAGC
CCGTTCGACG GCGGCATCCA GGCCACACCG CCGGCCATCG TGCGCGAACG CCTGCTGGCC
CAGCAGCAGG GGCGCGTCGA TGAGCTGCGC CACGCTAAGT ACGAGGGCAT CCTGGCCAGC
ACCCCGGCCA TCACGGTGCT GCGCGGCGAG GCCCGCTTCC AGAACGGGCA TGCCCTGAGC
GTGCGCCTGG CCGAGGGCGG TGAGCGCGAG GTGGCATTTG ACCGCTGCCT GATCGCCACG
GGCGCCAGCG CGGCCGTGCC GCCGATCCCC GGCCTGAAGG ACACCCCATA CTGGACCTCG
AACGAGGCGC TGGCCAGCGA CACCCTGCCC AAGCGGCTGG CCGTGATCGG CTCGTCGGTG
GTGGCCGTGG AGCTGGCGCA GGCATTCGCC CGGCTGGGCA GCCAGGTCAC GGTCCTGGCG
CGCAGCACGC TGTTCTTCCG TGAGGATCCG GCCATCGGCG AGGCCGTGAC GGCCGCGTTC
CGCGCCGAGG GCATCACGGT GCTGGACCAC ACGCAGGCCA GCCAGGTGGC CTACGCGAAC
GGTGAATTCG TGCTCACCAC CGGGCACGGT GAAATCCGCG CCGACCAGTT GCTGGTCGCC
ACCGGCCGCG CGCCGAACAC GCGTGAGCTG GCGCTGGAGG CGGCGGGGGT GAGGGACAAC
GCGCAAGGGG CCATCGTCAT CGACAAGGCG ATGCGCACCA GCGCACAGAA CATCTACGCC
GCCGGCGATT GCACCGACCA GCCGCAATTC GTCTATGTGG CCGCAGCGGC CGGCACCCGC
GCGGCGATCA ACATGACCGG AGGCGATGCC GCGCTCGATC TGAGCGCCGT GCCGGCGGTG
GTGTTCACCG ACCCGCAGGT CGCCACCGTT GGCTACAGCG AAGCGGAAGC GCACCACGAT
GGCATCGAGA CCGATAGCCG GCTGCTCACG CTGGACAACG TGCCGCGGGC GCTCGCCAAC
TTCGACACGC GCGGCTTCAT CAAGCTGGTC GCTGATGCTG GCAGTGGGCG CTTGATCGGC
GTGCAGGCGG TGGCGCCGGA AGCGGGTGAA CTGATCCAGA CGGCGGCCCT GGCAATTCGC
AACCGCATGA CGGTGCAGGA ACTGGCCGAC CAGTTGTTCC CGTACCTGAC CATGGTCGAG
GGACTCAAGC TTGCCGCGCA GACCTTCTCC AAGGACGTGA AGCAGCTGTC CTGCTGCGCT
GGGTGA
 
Protein sequence
MTHLKITGMT CDSCAVHVKD ALEKVPGVRS AVVSYPKGTA QIATDPGTST DALTAAVAGL 
GYRVMLGEAP PVEKRGNLLD KALGWLASGE KSAGEGSALR IAVIGSGGAA MAAALKAVEQ
GAQVTLIERG TIGGTCVNVG CVPSKIMIRA AHIAHLRRES PFDGGIQATP PAIVRERLLA
QQQGRVDELR HAKYEGILAS TPAITVLRGE ARFQNGHALS VRLAEGGERE VAFDRCLIAT
GASAAVPPIP GLKDTPYWTS NEALASDTLP KRLAVIGSSV VAVELAQAFA RLGSQVTVLA
RSTLFFREDP AIGEAVTAAF RAEGITVLDH TQASQVAYAN GEFVLTTGHG EIRADQLLVA
TGRAPNTREL ALEAAGVRDN AQGAIVIDKA MRTSAQNIYA AGDCTDQPQF VYVAAAAGTR
AAINMTGGDA ALDLSAVPAV VFTDPQVATV GYSEAEAHHD GIETDSRLLT LDNVPRALAN
FDTRGFIKLV ADAGSGRLIG VQAVAPEAGE LIQTAALAIR NRMTVQELAD QLFPYLTMVE
GLKLAAQTFS KDVKQLSCCA G