| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1764 |
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| Symbol | |
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| ID | 6287826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1863528 |
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| End bp | 1864784 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642625328 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001899334 |
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| Protein GI | 187928847 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.715826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.306921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAGAC TATTTCTGCC GCTCGGGCTG GCGGTAGCAT TTCTCAGCCC AAACTTTGCC
GTAGCGCAAT CTGACACCGG CACGTCCATG GTGCCCGTCT TCCCAAGGGA AGCGGCGGGA
CCGTTGACCC TCGAGGCCGC GTTGTCGCTG GCGGCAGGAA GCAATTTCAA CCTGTCCGCC
GCCGCCAAGG AACTCGATTC CACAGAAGGT GGGATCATGC AGGCCCGGGT TATTCCGAAC
CCGGAACTCC AGACGCTGGT CGAGGACACG CGGAAATCCA CCCGTACATC CACCGCCCAG
ATGAATATCC CCATCGAACT GGGCGGCAAG CGCTCGGCTC GTATCAATGC CGCGGAAAGG
ACGCGCGAAC TGGCGCAGGC AACGCTGGCT GGCGTTCGCG GTGACATTCG GGCGCAGGTA
ATCGAGAGCT TTTTTTCCGT CTTGATCGCA CAGGAACGCG TCAAGCTGGC AACTGGCTCC
GCGGATATCG CTGCGAGGGG CGCGCAAGCC GCTTCACGCC GCGTCGCGGC CGGCAAGATC
TCCCCGGTTG ACGAAACTAA GGCACGTGTC GAACAGGCCA ACGCCGAACT TGAATTGGCC
GAAGCAACGG CGAGCCTGCA GTCCGCCCGT CAGGCGTTGA CGGCGTTGTG GGGCAATGCA
TCGCCGCAGT TTACCGAAGC ACAGGGCAAT CTGGACGCGC TGCCATCCAG GCCGGCGCCT
GAACTCCTTC TGAAGGAGCT GGAAAACTCA CCGCTGGTGG CCGCAAGCCG CGCTGAACTT
GACCGCCGCC AGGCATTGGT GGGCGTTGAG CGCAGCCGCC AGTATCCGGA TCTGACAGTC
AGTCTGGGTG CCAAGCGAGA TACAGAAGCC AACCGCAACA TGGCGGTGAT CGGTGTGGCG
ATCCCGTTGC CGATTTTTGA CCGGAATCAG GGCAACTTGT ATTCGGCCAT TCGCCAGGCG
GACAAGGCCC AGGATGAATA TCTGGCCAAT CGCATCAGCC TGACCCGAAA TCTCCTGATG
GCATCGAACC AGCTGTCGGT ATCGCGCGCC TCGGCACAAA CGCTGAAGCA GACCGTCTTG
CCAGGCGCCG AGCAAGCCTT CAACGCGGCG ACCATTGGCT TCGAGGCCGG CAAGTTCAAT
TATCTGGACG TCCTGGATGC CCAGCGCACG CTGTTCCAGG CACGCATCCG CTATCTCGGC
GTGCTTGGAC AAACCTATCA GGCGGCGACC ACGATCGATC GCATTCTGGG ACGTTAA
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| Protein sequence | MRRLFLPLGL AVAFLSPNFA VAQSDTGTSM VPVFPREAAG PLTLEAALSL AAGSNFNLSA
AAKELDSTEG GIMQARVIPN PELQTLVEDT RKSTRTSTAQ MNIPIELGGK RSARINAAER
TRELAQATLA GVRGDIRAQV IESFFSVLIA QERVKLATGS ADIAARGAQA ASRRVAAGKI
SPVDETKARV EQANAELELA EATASLQSAR QALTALWGNA SPQFTEAQGN LDALPSRPAP
ELLLKELENS PLVAASRAEL DRRQALVGVE RSRQYPDLTV SLGAKRDTEA NRNMAVIGVA
IPLPIFDRNQ GNLYSAIRQA DKAQDEYLAN RISLTRNLLM ASNQLSVSRA SAQTLKQTVL
PGAEQAFNAA TIGFEAGKFN YLDVLDAQRT LFQARIRYLG VLGQTYQAAT TIDRILGR
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