Gene Rpic_1759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1759 
Symbol 
ID6286371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1855625 
End bp1857055 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content60% 
IMG OID642625323 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_001899329 
Protein GI187928842 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.804267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.497345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCCG GGACTTCGAT AACCCCGCTG TCACTGACGA GGCGGCTTGG GCTCTTCTTT 
GCATTGGTAC TGTCTATCGC GCTGGCCAGC ATGGGCGCCT TTGCTTACTA CTCGCTCGCC
GCGCAACTCG AGGCCAGAGA CGATGAGGTT GTAAAGGGAA AACTCGAACA GGTCGAGCAT
TTCTTGCGCG AGGTGGACGG GGTGCAGGGC GTCCCGGCGG CGCAGCATCG CTTCGATGAT
CTGGTGCGAG GTTACTCGGA CCTCATCGTT CGCGTCACGG CGCTGGATGG CCGGCTTTTG
TTTCGCACGG GCAACGATGC ATTGCTGGAA GGCACTGACC AAGCGGCGGT CACGGGAAAG
TCATCGCTCA TGTTCCAGTC CGCCGATGCG GTGTTGGGGC GAGACGGTAC GCGGGCGACG
GTGTTCGTGG CGAAGTCTGG CGAGGACAGG AAGCAGGTGA CTGCGCGATT CCGGACGACG
CTCGTGCTTG GTACCACCGT CGGTGTGATA TTGACGGCCC TGGTGGGGGC GGCCATTACG
CGCCGTGAGC TGGAGCCGGC GCACGTACTT ATCAAGCAGA TCAACCGGAT CAGTGTGGAA
CGGCTGAGCT ACCGGGTGGA CATGCCACCC AAGCCCACCG AAGTGCGTGA TATCGCCTCT
GCGTTCAATG CGATGCTGCA ACGCCTCGAG GATGGTTATC AGAAGCTGTC GCGGTTCTCC
GCCGATCTTG CCCATGATTT GCGCACGCCG CTTAACAACC TCATTGGACA TGCCGAGGTC
GCCTTGTCAC GAGACCGCAC CGGGCCCGAG TATGTCGCCT TGGTGGAGGA AAGCCTGGTC
GAATACCAGC GACTTGCGAG GATGATCGAT GCGATGTTGT TCCTCGCGCG AGCTGACAGT
GCCAATGTGG CGCTCGAGTT GACGGAACTC CAGTTGAATG CAGAACTTCG CAAGTTGTCC
GCCTACTTTT CGGTGCTTGC AGAGGAGCGA AGCGTCGTAA TCAGGGTAAG CGGGGATGCC
ACCCTGGTCG CTGATGCCAT TCTGTTCCAG CGTGCGATCA ACAATGTTCT GTCAAATGCG
GTCCGTCATG CGTGGCCGAA TTCGATGATA GATCTGGTGG TGCGCCGCGA AGCGGCACAT
TGTTGCATCG ACATCACGAA CGTTGGAGAC CCAATCCCGG AGCGGGAACT TTCCCTCATC
TTTGATCGGT TCTTCCGTGG GGATAGGGCG AGATCCAACT CGTCACAGTC CACGGGGCTG
GGCCTGGCCA TCGTCCTGTC GATCATGGAG CTCCATGGCG GCGACGCGTC AGCCGTGAGC
GGCTTGGATG GGAAGACACG CTTTACATTG CGCTTCCCGC TCAACGGTGC TGAAGCCTCA
GCGCGGGTTT CGGTGGGTAG GCCGAGTCAG GACCGACCAG TCGTTGGGTA G
 
Protein sequence
MRPGTSITPL SLTRRLGLFF ALVLSIALAS MGAFAYYSLA AQLEARDDEV VKGKLEQVEH 
FLREVDGVQG VPAAQHRFDD LVRGYSDLIV RVTALDGRLL FRTGNDALLE GTDQAAVTGK
SSLMFQSADA VLGRDGTRAT VFVAKSGEDR KQVTARFRTT LVLGTTVGVI LTALVGAAIT
RRELEPAHVL IKQINRISVE RLSYRVDMPP KPTEVRDIAS AFNAMLQRLE DGYQKLSRFS
ADLAHDLRTP LNNLIGHAEV ALSRDRTGPE YVALVEESLV EYQRLARMID AMLFLARADS
ANVALELTEL QLNAELRKLS AYFSVLAEER SVVIRVSGDA TLVADAILFQ RAINNVLSNA
VRHAWPNSMI DLVVRREAAH CCIDITNVGD PIPERELSLI FDRFFRGDRA RSNSSQSTGL
GLAIVLSIME LHGGDASAVS GLDGKTRFTL RFPLNGAEAS ARVSVGRPSQ DRPVVG