Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1749 |
Symbol | |
ID | 6288181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1844762 |
End bp | 1846369 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642625313 |
Product | glycosyl transferase family 39 |
Protein accession | YP_001899319 |
Protein GI | 187928832 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.327651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTGA CCATCGCACT CACGGTGGTC CTCTGGATGT CCACGCTATC CGTGCGTCCC CTCTATGAAC CCGACGAGGG TCGTTACGCC GAGGTTCCGC GCGAGATGTT CGTCTCCGGC GATTGGGTCA CGCCGCGGTT GAACGGCATC AAGTTCTTCG ACAAGCCGCC CCTGCAGTAT TGGGCGACCG CCAGCGCCTA TACGCTCTTC GGGCCGTCCG AGTGGACAGC AAGGATCTGG AGTGCGCTTG TGGGACTGCT GGGCGCACTC GCCGCATGGT GGGCGGCGCG ATCGCTCTAT GACACGCGCA TAGGCCTCGC CTCAGCGCTG GTGCTCATCG GCGCTCCCCT CTGGATTCTC GGCTCGAATC TGACAACAAC AGACATTGGT GTCGGCGCAC TGCTCGGCAG TGCCGCTCTC GTTTTCGCCG TGGCCTACCA GAATCGGGAA CCTCGCTTAT ACCCCCTGAT CTGGTTGTTG GTCGGTCTGG CATTTCTTGC CAAAGGCCTG ATTGCCCTGG TACTGCCAGG AATCACGCTG CTGCTATACG GGGCGGTCAC TCGACAATTT TCCGCATTTT TTAGCGCGAG ATTCTGGCGC TGGAGCCTGC TTGCGGTGGC CATCACCATG CCTTGGTTTG TCGTGGTGTC CCAGCGCAAC CCCGAATTTC TGAATTACTT CTTCATCCAC GAACACTTCG CGAGATTCTC GTCCTCGGTT CACGAGCGGG ACAAGCCATT CTGGTTCTTC CTGGCCGTTG GTGCGGCAGG CGTCCTGCCG TTCATGGGCT TGATTCCCCG TGCTATCGCA CTCCGCTCTC GCAGCGCACA GGCAACGCCT GGCTTCGACG CACGACTGTT TCTGTCGCTG TGGGTAGTCG TTGTCATTGC CTTCTTTTCG ATTTCGCGCT CGAAGCTGCC GCTCTATATC CTGCCCGCCT TACCACCGGT GGCCGTCTTG CTCGCGTACA GATCCATGAC TGCAGCCCGC CCCACACTGG CGGCAAGCTT TCTTGCCATG CCTGTGCTCG GCGTTGCCAT CGCCGTGCTG CTATGGCATC CGACAATGTC GAATGCGGTA CTGAAGCTCA ATATCAGCAA TCCGGCCTCA TTGCATACCT GGGGCGCCAT CACGATGGGC ATTCTGGTCA TCGGTGGCTT CCTGGCCTTT GGGATCGCCC TGCGCGGCCA CAGGCTCTGC GCGGTTGCCG TCGCTTCGCT GGCGACGCTG GCCAGCCTTC AGGCTGGCTT GATGGCGTCT CGGGCGTTTG GGTCCCTCTC CATCAAACCA CTTGGCTTGG AAGCCAAGGC GGCGTCCCGC GACAACACAC AACTGTTCAA CGTGGGCCAG ATTGACCGAG GTCTGGCGTT TTACGCCGAA CGAGAACCGA TCATTGTCGG GGCCAGATCC GAGCTGGATC TCGGCTTCTC GGTCGAGCCC GACAAGTGGA TTGCTAATGA AGAAGCTTTT GCGCAGCGAT GGCTGACCCC TGGTCACAAG CTCGCGGTCA TGCGGCACGA GACGTTTCAT CGACTGAGAC CGCTGCTCGG CGGCAACACA ACTGTGATCG GACGACATGG CGTCAACGTT CTGGTGCAAA AACCATGA
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Protein sequence | MALTIALTVV LWMSTLSVRP LYEPDEGRYA EVPREMFVSG DWVTPRLNGI KFFDKPPLQY WATASAYTLF GPSEWTARIW SALVGLLGAL AAWWAARSLY DTRIGLASAL VLIGAPLWIL GSNLTTTDIG VGALLGSAAL VFAVAYQNRE PRLYPLIWLL VGLAFLAKGL IALVLPGITL LLYGAVTRQF SAFFSARFWR WSLLAVAITM PWFVVVSQRN PEFLNYFFIH EHFARFSSSV HERDKPFWFF LAVGAAGVLP FMGLIPRAIA LRSRSAQATP GFDARLFLSL WVVVVIAFFS ISRSKLPLYI LPALPPVAVL LAYRSMTAAR PTLAASFLAM PVLGVAIAVL LWHPTMSNAV LKLNISNPAS LHTWGAITMG ILVIGGFLAF GIALRGHRLC AVAVASLATL ASLQAGLMAS RAFGSLSIKP LGLEAKAASR DNTQLFNVGQ IDRGLAFYAE REPIIVGARS ELDLGFSVEP DKWIANEEAF AQRWLTPGHK LAVMRHETFH RLRPLLGGNT TVIGRHGVNV LVQKP
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