| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1723 |
|---|
| Symbol | |
|---|
| ID | 6286200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 1817258 |
|---|
| End bp | 1817749 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642625287 |
|---|
| Product | protein of unknown function DUF411 |
|---|
| Protein accession | YP_001899293 |
|---|
| Protein GI | 187928806 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3019] Predicted metal-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATGA AATCGCCGAC TGCCAAGCCC GTGTCCGCGA CAAGACGGTC CCTGATTGCA
GGTCTGTTAC TGCTGCCTGC CGTAGCCCTG GCGCAAAAGG CCGGATCGAA ACCCGTGATC
CAGGTGTGGA AAACGCCGGG TTGCGGCTGC TGCAAGGATT GGCTTGCCCA CTTGCGGGAC
AACGGGTTCG ACGTGGTTGC ACATGACGTC GAGGAAACGG TGGAAGCCAG GCGAAAGGCT
GGCATGCCAG AGCGCTATGC CTCTTGTCAC ACGGGCATCG TGCAGGACTA TGCGCTGGAA
GGCCATGTTC CGGCACGCGA AATCAAGCGT CTGCTGCAGG AGCGCCCGAA AGCGATCGGG
CTGGCGGTCC CCAGCATGCC GCTCGGCGCC CCTGGCATGG ATGGGCCGGC ATACGGTAAT
CGGCGCATGC CATACAACGT CCTGCTGATC GGATTGGACG GACAGGCCAC CGTGTTCCGC
GCATACAGCT GA
|
|---|
| Protein sequence | MMMKSPTAKP VSATRRSLIA GLLLLPAVAL AQKAGSKPVI QVWKTPGCGC CKDWLAHLRD
NGFDVVAHDV EETVEARRKA GMPERYASCH TGIVQDYALE GHVPAREIKR LLQERPKAIG
LAVPSMPLGA PGMDGPAYGN RRMPYNVLLI GLDGQATVFR AYS
|
|---|
| |