Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1702 |
Symbol | |
ID | 6288683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1793426 |
End bp | 1795570 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642625266 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_001899272 |
Protein GI | 187928785 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.575929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAGC CACGGCGCTT GCGCCCGCGC GCGCGGCCCC AATGTCGCGG GTTGATGAAG GTCAACCTCG GCGATTTCCA AGCGTCAATA CTGGGAACGC ATACCAATGC GCGGTTGTCC GGCGCCTACC CAGGCCGCCC ACCAACCTTC CCAGCATTGG AGACCAGACT CACTTTCAAT AAGGTCGACT TGGAGAAGAA TCCCATGGAA CCGCGACAGC AACAGTTCTC CCTCTGGTAC GTGCTCGTGA CCATACTGGC CATGCTTGCA ATCCAGACGC TCTTCGTGTC GGGGCATGTC GAGACGATCC CATACAGCGA TTTCAAGGTC CTACTGAAGG CTGGCAAGCT CAAGGACGTG GCTATTGGTG AGCAGGCTAT CAGCGGAACC TTCTCGACAG AAGGTATCGA CAATCTCCTT GCCAAGCAGC AGATCGAGGA AATCCGCCGA GAGGCAAAGG GCGACCACGC CTTCTCCACG CTTCGAGTGG CCGATCCTGA GCTGGTGCAG GAGCTCGAAG CGGCAAAGGT GCGCTTCGTC GGGCAGCCCG ACAACAAATG GCTGAGCACG ATCCTCTCGT GGGTTGTGCC GGCCGTCATC TTTTTCGGTA TCTGGAGCTT TCTCATCAAG CGCGTGGGCG GCGCCGCCGG CAGCATGATG GAAATTGGCA AGAGCAAGGC AAAGGTCTAC ATGCAAAAGG AGACCGGCGT GACTTTTGCC GACGTGGCTG GAATCGACGA AGCCAAGGAG GAGCTGTCGG AGATTGTTAG CTTCCTGAAA GATCCTCAGC GGTACCAGCG CCTGGGCGGA AAAATTCCCA AGGGCGTGCT GCTGGTTGGG GCCCCGGGCA CTGGCAAGAC CTTATTGGCA AAGGCCGTGG CAGGCGAAGC CGGCGTGCCA TTCTTCAGCA TGAGCGGCTC CGACTTCGTC GAGATGTTCG TTGGTGTGGG TGCAGCACGG GTCCGCGATC TCTTTAAGCA AGCCGAAACC AAAGCCCCCT GCATCATCTT CATTGATGAG CTTGACGCAC TCGGAAAGAC GCGAGCACTG AATGCGGTCG GCGGCAACGA GGAGCGCGAA CAAACACTGA ACCAGCTTCT GGTCGAGATG GACGGTTTTG ATAGCAACAA AGGCGTCATC ATCATGGCCG CCACAAACCG ACCCGAGATA CTGGACCCCG CCCTGCTTCG CCCCGGTCGC TTTGACCGCC ACGTCGCACT GGACCGGCCT GACCTCAAGG GACGGGAGCA GATTCTCAAA GTTCACGTCA AGGGCGTTGT CCTCGCTCCT GAGGTCGACC TGACTAAACT CGCCGGACGG ACCCCGGGGT TCGCAGGTGC CGATCTTGCC AACTTGGTTA ACGAAGCCGC GCTCCTTGCC GCGCGCAAGA GCAAGCAAAT GGTCGAGATG GCAGATTTCG ACGAGGCGCT TGACCGGATC GTCGGCGGCC TGGAAAAAAA GAACCGCGTG ATGAATCCGA AGGAGAAGGA AACTATCGCA TTCCACGAGG CAGGACATGC CATCGTCGCG GAGCATCGGC CGCTGGCTGA CCGTGTCTCC AAAGTTTCCA TCATTCCGCG GGGCGTTGCG GCGTTGGGTT ACACGCAACA GACCCCAACC GAGGACCGCT ACCTGCTCAA GCGCAGCGAA CTGCTTGACC GGCTCGATGT CTTGCTCGGT GGCCGTATTG CGGAACAGCT CATTTTCGGC GACGTATCCA CGGGCGCACA GAACGACCTG CAGCGCGCAA CCGACATGGC TCGGCAGATG ATTACCCAGT TTGGCATGAG CGACCAGCTG GGCCTGGCCA CGTACGAGAA TATGCCGAAC CCGCTCTTTG CTGGGACGGG GCTAATGCAG CGCGAACGCA ATGAATACAG CGAGAGCACC GCACAGATGA TTGATGCTGA AGTCCGTAAG CTATTGGCAG AAGCAAGTCA TCGCGTACAA GCGACGCTGG AAGGACAGCG GACCAAGCTC GATGCTCTGG CCCAATTACT TCTCGAGAAG GAAGTGGTTG ACCGCCAAGA CCTGGACATG TTTTTGTCAG CGAAGGTGAC GCCAATGCCT CCGCCCAAGC CCGTCGCGAA TATCGAGGAG TCAACTGCAA CGGGGAAACC GGACCAAAAA ACGCAAGGCA CATAG
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Protein sequence | MEKPRRLRPR ARPQCRGLMK VNLGDFQASI LGTHTNARLS GAYPGRPPTF PALETRLTFN KVDLEKNPME PRQQQFSLWY VLVTILAMLA IQTLFVSGHV ETIPYSDFKV LLKAGKLKDV AIGEQAISGT FSTEGIDNLL AKQQIEEIRR EAKGDHAFST LRVADPELVQ ELEAAKVRFV GQPDNKWLST ILSWVVPAVI FFGIWSFLIK RVGGAAGSMM EIGKSKAKVY MQKETGVTFA DVAGIDEAKE ELSEIVSFLK DPQRYQRLGG KIPKGVLLVG APGTGKTLLA KAVAGEAGVP FFSMSGSDFV EMFVGVGAAR VRDLFKQAET KAPCIIFIDE LDALGKTRAL NAVGGNEERE QTLNQLLVEM DGFDSNKGVI IMAATNRPEI LDPALLRPGR FDRHVALDRP DLKGREQILK VHVKGVVLAP EVDLTKLAGR TPGFAGADLA NLVNEAALLA ARKSKQMVEM ADFDEALDRI VGGLEKKNRV MNPKEKETIA FHEAGHAIVA EHRPLADRVS KVSIIPRGVA ALGYTQQTPT EDRYLLKRSE LLDRLDVLLG GRIAEQLIFG DVSTGAQNDL QRATDMARQM ITQFGMSDQL GLATYENMPN PLFAGTGLMQ RERNEYSEST AQMIDAEVRK LLAEASHRVQ ATLEGQRTKL DALAQLLLEK EVVDRQDLDM FLSAKVTPMP PPKPVANIEE STATGKPDQK TQGT
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