| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1648 |
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| Symbol | |
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| ID | 6287247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1734218 |
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| End bp | 1735522 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642625212 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001899218 |
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| Protein GI | 187928731 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTGC GTTTTCCCCC ACGCGGTGGG CGCTTGCTCG CGCTCGCCGT CCTGCTGCTT
TTAAGCAGTC ATCTGGCGTA TAGCCAGACC GATGCGCTCT CCTTGCAGGA AGCGATCGGC
TTGGCATCGT CCCGCTCCGC CGACGCGGAA ACCTCCCGCG CCGGTGTACA GTCGGCGCTC
GACATGGCCG TGGCGGCAGC CCAACTGCCC GACCCTGTCC TCAAATTCGG CGTGAACAAT
GTTCCCGCCG ATGGCAGCGA CCGGTTCTCC ATCGGCACCG ATTTCATGAC CATGCGCTCG
GTCAGCGTGA TGCAAGAGCT CACGCGGACC GAGAAGCGCC GTGCCCGTGC GGAACGTTTC
AACGCCGAGG CCTCCGCGGC CGAAACACAG CGTGTCGCCG CGCTGGCAGC CGTCCAGCGC
AGCACAGCGC AAGCCTGGCT TGACCGCTGG TATGCCGCAC GTACCGTTCA ACTGCTGGCG
GAACAAACAG CCTCTGTCGC CTTGCAGGTC GAGGCAGCCG AGGCGGCCTA TCGCGGCAAT
CGCGGCTCAC GCGCCGACAT CGTAGCTGCA CGCCTTGAAC GGCAGCAGTT GCAAGACCGG
ACCGACGAGG CCCGGGCGAC GGAAGCGTCT GCCAAGGCCA TGCTGCGGCG CTGGGTAGGC
GACGCATCCA GCCGCCCGCC CGCCGCGCCC CCCAGGTTCG ACGTCCCGCA GTGGCTCGAC
GCGCTGGACG ACGCGGCCAT CGATACCCTG CCCGATGTGG CCGCTGCCAG CGCGCAAGCC
GCCATGGCGG ACGCTGAAGG ACGTGTCTCT CGTGCGGCCA AGACACCCGA CGTGACGGTG
GAGCTGATGT ATAGCCAGCG CGGACCGGCT TACGCCAACA TGGTGTCGTT GAACGTCTCC
CTGCCGATTC CCTGGGATCA GAAGAACCGC CAGGACCGCG AGGTCTCGGC CAAGCTGGCG
CAAGCCAATG CCGCGCGCGC TCAAGCAGAA GTCTTGCGGC GCAACATGGT GGGCCAGATT
CTGGGCAAGC GCGAGACGTT GCGACTGAAC CAACGCCGCC TGGATCGCTA TCAAACCACG
ACCGTCCCGC TAGCGCGCGC GCAAACCGAG GCAGCGCTAA CGTCCTACCG GACTGGAAGC
GGTTCGCTCG CCGCGGTCGC CGAGGCAAGC CGCAAGGCAC TCGACCTTGC GCTGGAACGT
CTCAAGCTCG AAGCGTCGAC GGCCCAACTC TGGGCCGAGC TCGCCTTCCT CAAACCGCTC
CCCACGGCAA ACCAGCCGAC CTCCAACGTT GGAGTTCAAC CATGA
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| Protein sequence | MLLRFPPRGG RLLALAVLLL LSSHLAYSQT DALSLQEAIG LASSRSADAE TSRAGVQSAL
DMAVAAAQLP DPVLKFGVNN VPADGSDRFS IGTDFMTMRS VSVMQELTRT EKRRARAERF
NAEASAAETQ RVAALAAVQR STAQAWLDRW YAARTVQLLA EQTASVALQV EAAEAAYRGN
RGSRADIVAA RLERQQLQDR TDEARATEAS AKAMLRRWVG DASSRPPAAP PRFDVPQWLD
ALDDAAIDTL PDVAAASAQA AMADAEGRVS RAAKTPDVTV ELMYSQRGPA YANMVSLNVS
LPIPWDQKNR QDREVSAKLA QANAARAQAE VLRRNMVGQI LGKRETLRLN QRRLDRYQTT
TVPLARAQTE AALTSYRTGS GSLAAVAEAS RKALDLALER LKLEASTAQL WAELAFLKPL
PTANQPTSNV GVQP
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