Gene Rpic_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1643 
Symbol 
ID6288072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1726116 
End bp1728518 
Gene Length2403 bp 
Protein Length800 aa 
Translation table11 
GC content65% 
IMG OID642625207 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001899213 
Protein GI187928726 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.960315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATT GCGGCTCCAA GGGGTGCGGT TGTGCTGCCA CCAACGTGGT GACGCCGGCG 
GACGGCGATG CGGCGGCTGT TGACCTGAAA CGATCCCGCT ACCGGATCGA CAACATGGAC
TGCCCGACGG AAGAAACGCT CATTCGCAAT AAGCTGGCGG CGCTGCCCGG CGTGGTCAAC
CTTGAGTTCA ACCTGATGCA GCGTTCGCTG GCCGTCCAGC ACCGGCTGCC ATCCCCGGCG
CCGATCGAGC AAGCCTTGGC AGCCGTTGGC ATGCGAGCGG TTCGCGCCGA TGAAAGCCCC
GCCGGGCAGA GCACAGTCCT GACCATTCGT CAGATGGACT GCCCGACCGA AGAAACGCTG
ATTCGCGGCA AGCTGGCGGG CATGGCGGGC GTGTCAGACA TGCAGTTCAA TCTCGTCCAA
CGCACACTCG CCGTTCAACA CGCTGCCGAT GCGCTACCGC AAGTGCTGGC TGCCATTCAG
TCGCTTGGCT TCGATGCCGA GGTGCGCGAC CGCTCTGCCG CAGCACCGCT TCCCGAACAA
GATGCCGCGC CCACCAAATG GTGGCCGCTT GCCATTGCCG GCGCGAACGC CGTCTTGGCG
GAAGTGGTGT ATTGGCTCAA CGGTGGCAAC CATTGGGTGG TGGTGATCCT GGCGCTGGCC
GCGATCCTGA CCGGCGGGCT GTCCACCTAC AAGAAAGGCT GGATCGCGCT CAAGAACCGC
AACCTGAACA TGAACGCCCT CATGTCGATC GCAGTCACTG GGGCGATGGT GATCGGCCAT
TGGCCGGAAG CGGCGATGGT GATGGTCCTC TTCGCCTTGG CGGAGGTCAT CGAAGCCCGT
TCGCTGGACC GCGCCCGAGA TGCGATCCGG GGGCTGATGG ATCTCGCCCC GGAGACAGCC
ACGGTACAGC GCAGCGACGG CAGTTGGTCC GACGTCGATG CCAAGACCGT GGCCGTTGGC
AGCCGTGTGC GGGTCAAGCC GGGCGAGCGC ATCGCGCTCG ATGGCACGAT TCTGCAGGGG
CGGTCATCCG TCAATCAGGC GCCGATCACG GGCGAGAGCC TGCCGGTCGA GAAGGCAGCG
GGCGACTCCG TGTTCGCCGG CACCATCAAC GAATCCGGGT CGTTCGAATA TCGCGTCACC
GCAGCGGCAA GCGACTCCAC ACTGGCACGG ATCATTCACG CCGTCGAGGC CGCGCAAGGC
AGTCGAGCGC CCACGCAGCG CTTCGTTGAC CAGTTCGCCC GGCTGTACAC GCCCATTGTG
TTCGCGGTTG CGCTTGCGGT GGCCATCGTC CCTCCGCTGG TCTTCGGTGC GACTTGGCTG
GACTGGATCT ACAAGGCCCT AGTTCTTCTC GTGATTGCTT GCCCCTGCGC GCTCGTGATC
TCGACGCCGG TGAGCATTGT GAGCGGCCTG GCGGCCGCCG CGAAGCGCGG CATCCTCATC
AAGGGCGGCG TCTATCTGGA AGAGGGACGC AAGCTGAAAT GGTTGGCGCT CGACAAGACC
GGCACGATCA CGCACGGCAA GCCAGCGCAG ACGGACGTCG TGGCCTGGAA CGGTGCGGAC
GCGTCCGCCG CCCAGATCCT GGCAGCTAGC CTGGCTGCCC GCTCCGACCA TCCCGTCTCC
CTGGCCGTGG CCCGCGCGGC GCAGGACCAA GGCCTAGCCC TGCGCGACGT CACCGATTTT
GCGGCCTTGC CCGGACGCGG CGTCCGGGGC CATGTCAACG GTGCGCTCTA TCACCTGGGC
AATCATCGTC TGGTCGAGGA ACTGGGCGTG TGTTCGCCGG CATTGGAAGC ACAGCTTGCC
GTGCTGGAAA CCCAGGGCAA AACGGTCGTG ATGCTGATCG GCCAGGACGG CGTACGCGCG
TTGTTCGGTG TGGCGGACAC CATCAAGGAC AGCAGTCGCC AAGCGATCAA GGAATTGCAC
GCACTGGGCA TCAAGACTTT GATGCTGAGC GGCGACAATC CGCACACCGC AGAGGCGATT
GCGCAGCAGG TCGGTATCGA CGAGGCTCGC GGTAATCTGC TGCCGGAAGA CAAGCAGCGC
GAAATCGAGC GCCGATCCGC ACAAGGAACC ATCGGCATGG TCGGCGATGG CATCAACGAT
GCGCCGGCGC TGGCACGGGC CGATATTGGA TTCGCAATGG GCGCGGCCGG GACGGACACG
GCGATCGAAA CGGCCGACGT TGCGCTGATG GACGACGATC TGCGCAAGCT CCCGGCGTTT
GTACGACTAT CCCGGTCCAC GGCCGGGGTG CTGAAGCAGA ACATTGCGCT GGCGCTCGGC
ATCAAGGTCG TGTTCCTGGC ACTGACCTTT ACAGGCCAGG CCACCATGTG GATGGCGGTG
TTTGCCGACA TGGGCGCCAG CCTGCTGGTG GTCGGCAACG GGCTGAGGTT GCTGCGCAAA
TGA
 
Protein sequence
MSDCGSKGCG CAATNVVTPA DGDAAAVDLK RSRYRIDNMD CPTEETLIRN KLAALPGVVN 
LEFNLMQRSL AVQHRLPSPA PIEQALAAVG MRAVRADESP AGQSTVLTIR QMDCPTEETL
IRGKLAGMAG VSDMQFNLVQ RTLAVQHAAD ALPQVLAAIQ SLGFDAEVRD RSAAAPLPEQ
DAAPTKWWPL AIAGANAVLA EVVYWLNGGN HWVVVILALA AILTGGLSTY KKGWIALKNR
NLNMNALMSI AVTGAMVIGH WPEAAMVMVL FALAEVIEAR SLDRARDAIR GLMDLAPETA
TVQRSDGSWS DVDAKTVAVG SRVRVKPGER IALDGTILQG RSSVNQAPIT GESLPVEKAA
GDSVFAGTIN ESGSFEYRVT AAASDSTLAR IIHAVEAAQG SRAPTQRFVD QFARLYTPIV
FAVALAVAIV PPLVFGATWL DWIYKALVLL VIACPCALVI STPVSIVSGL AAAAKRGILI
KGGVYLEEGR KLKWLALDKT GTITHGKPAQ TDVVAWNGAD ASAAQILAAS LAARSDHPVS
LAVARAAQDQ GLALRDVTDF AALPGRGVRG HVNGALYHLG NHRLVEELGV CSPALEAQLA
VLETQGKTVV MLIGQDGVRA LFGVADTIKD SSRQAIKELH ALGIKTLMLS GDNPHTAEAI
AQQVGIDEAR GNLLPEDKQR EIERRSAQGT IGMVGDGIND APALARADIG FAMGAAGTDT
AIETADVALM DDDLRKLPAF VRLSRSTAGV LKQNIALALG IKVVFLALTF TGQATMWMAV
FADMGASLLV VGNGLRLLRK