| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1641 |
|---|
| Symbol | |
|---|
| ID | 6287823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 1723524 |
|---|
| End bp | 1725452 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642625205 |
|---|
| Product | iron permease FTR1 |
|---|
| Protein accession | YP_001899211 |
|---|
| Protein GI | 187928724 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
|---|
| TIGRFAM ID | [TIGR00145] FTR1 family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTGC AGCGCGTCGT CACCCTCATC CTGTTCTACC TGCTGACATC GGTTTCAAGC
GCGTACGCCG ACACGCTGTC CACTCAAGAC AAGACCAAGC AGGTCTGGCA ATTACTCGAC
TATCTGGCGG TCGATTACGG TCGCTCCGTC AAGGACGGCC AGGTGGCCAA TGCCGATGAG
TACGCCGAAA TGCAGGAGTT TGCGCATGCG GCGCAGCGCC AGATTGCCGA GTTGCCGGCG
GGGCCACAGA CGCAAGCCTT GCTCAAGGAT GCTGGCGCGT TGCGCACGCT CATCGCCGAC
AAGGCCGCAC CCACCGTCGT CGGTGAACAG GCGCATAAGC TCGCGGACAG CTTGCTGGCC
GCCTACCCGG TGCCGATGGC GCCCAGCAAG GTGCCCGACC TGAAGCATGG AGCTACGCTG
TATCAAAGCC AGTGCGCGTC CTGCCATGGC AACACCGGAC ACGCCGATGG TCCGCTGGCC
GCCAAGCTGA GCCCGCCCCC CATAGCCCTG GCCGATCATC AGCGCGCCCA GGAGCGCAGC
GTCTTCGCCC TCCAGCAGAT CATCACGCGC GGTGTCGAGG GCACCTCGAT GCCGAGCTTC
GCGCAGCTCA CTGACGATGA TCGCTGGGCA CTGGCCTATT TTGCGTCGAC CTTGTCCTAT
TCCGATGCGG ACCGGCAAGC CGGCGCCAAA TTGTGGGCAT CCCGCCCGGA GCTGCATAGC
GCGGTGCCGA CGCTCGCCAA GCTCAGCCAG ACGCCAGAAG CGTTGCTGGC CAAGACGATC
AGCCCGGATG CCGCGCGGCA ATTGACCGCC TATTTGAGAA GCGCGCCGGA TGTGCTGAAC
GCCTCCAACG CAGACAGTCT CGCAATCGCC AAGGACAAGC TCAAAGAGAG CGTAGCCGCC
TTCGACCAGG GCGACAAAGC GACTGCCTCG CGCCTGGCGC TCTCCGCCTA CCTCGACGGC
TTCGAGCCGG TCGAACCGGC CCTGGCCGCC AAGAACCAGT CGCTGTTCCA GGACATCGAA
AAAATGATGG GCCTGTATCG CAACGCGATC ACTACCGGTC AGGCCGAGCA GGTACGGGAC
ATCGCGCAGC ATCTGCAGAC GATGCTGACT GAAGCCCAGG ATGCACTGGG TGGCACCAAC
GACCCGCTGT CGACGTTCCT GGGCGCCTTG ACGATCCTGC TGCGCGAGGG CCTGGAGGCA
CTGCTTGTCG TGGTCGCCAT GATGGCCTTC CTGAAGAAGG CCGAACGCAC CGACGTGCTG
CCATACGTCC ATGCCGGCTG GATTGTTGCG CTGGCCGCCG GTGGACTGAC GTGGGCCGTC
GCTACCTACC TGGTGGATTT GAGCGGTGCC AGCCGCGAGA TGACCGAAGG CTTCTCGGCA
ATCTTTGCGG CCGTGGTCCT GCTCGGCGTG GGCATGTGGA TGCACCAGAA GAGCCTGGCC
GGTCGCTGGC AGGCCTATGT GAAGCAGAAG CTGTCCTCCG CGCTGAACAA GCGCTCGGCG
ATCATGCTGT TCGTGCTGTC ATTCGTGACG GTGTACCGCG AGGTGTTCGA GACCGTGCTG
TTCTACGCCG CGCTGTGGAG CGAAGGGAAC GGCATCTACC TGCTGGCCGG CTTGGGCTCC
GGGATTGCGA TCCTGGCGAT CATCGCCGTC GTGCTGCTGC GCTCCTCGGC GCGCCTGCCG
ATCCGCCAGT TCTTTGCCTT CAGCTCGGCT CTGGTCGCGG TCCTGGCAGT GGTGCTGATC
GGCAAGGGCG TTGCGGCGTT GCAGAAGGTT GGTTTTCTGC ACATCACGCC GATTTCGATG
CCGCGTATTG ACGTGCTGGG GATTTACCCG TCCATGCAGA CGGTGATCGC ACAGGTGGCG
ATCTTGCTGA TCATTGTGCT CAGCTTCGCG TATAACCTCC GATCGCAGAA GGCATCGAGC
AAAGCGTAG
|
|---|
| Protein sequence | MQLQRVVTLI LFYLLTSVSS AYADTLSTQD KTKQVWQLLD YLAVDYGRSV KDGQVANADE
YAEMQEFAHA AQRQIAELPA GPQTQALLKD AGALRTLIAD KAAPTVVGEQ AHKLADSLLA
AYPVPMAPSK VPDLKHGATL YQSQCASCHG NTGHADGPLA AKLSPPPIAL ADHQRAQERS
VFALQQIITR GVEGTSMPSF AQLTDDDRWA LAYFASTLSY SDADRQAGAK LWASRPELHS
AVPTLAKLSQ TPEALLAKTI SPDAARQLTA YLRSAPDVLN ASNADSLAIA KDKLKESVAA
FDQGDKATAS RLALSAYLDG FEPVEPALAA KNQSLFQDIE KMMGLYRNAI TTGQAEQVRD
IAQHLQTMLT EAQDALGGTN DPLSTFLGAL TILLREGLEA LLVVVAMMAF LKKAERTDVL
PYVHAGWIVA LAAGGLTWAV ATYLVDLSGA SREMTEGFSA IFAAVVLLGV GMWMHQKSLA
GRWQAYVKQK LSSALNKRSA IMLFVLSFVT VYREVFETVL FYAALWSEGN GIYLLAGLGS
GIAILAIIAV VLLRSSARLP IRQFFAFSSA LVAVLAVVLI GKGVAALQKV GFLHITPISM
PRIDVLGIYP SMQTVIAQVA ILLIIVLSFA YNLRSQKASS KA
|
|---|
| |