Gene Rpic_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1601 
Symbol 
ID6288730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1691152 
End bp1691874 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content60% 
IMG OID642625165 
Producthypothetical protein 
Protein accessionYP_001899171 
Protein GI187928684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0157654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA TCTTGACCGC CAGTCGGTCT CATGACGTGG CCCTGCAAGG GGCCATTTTG 
CTGTATGGGC CGGCCGAGGG GCAGTTCACA TACTCGACGG CACACCGCAT CACTCACGAG
GCGGGGACTC GAAAGCCTGC AATCGGCCCG GGTGTTCCGC TCAATCGGCG AGCACTCATT
CACGCTGTGA CCCAGGTTGC TTTGTCAGCG TTGCCGAAGG GCGAGTTCCT GACGCCGAAC
GTACTGTCCG TGAGCACGCG CGCCGTAACG TGGTGGTGCC CGCCGGCGAT TCGCCGGGTG
TTCTTTCAAT GCAAAGAATT GGGTACGCGC AGTGCGGTAG TGCCGCACCC GGGCTTGGTG
TTCCAGGCGG CCAATGACGG GTTCAGCGTG TTTGCCTTGA TGGAGGACGT CAGGCCGACG
CCGGAATCCA TGCTGCACGA GCCGCCGTAC TTCAATACGT GGGACGTGGG AAGGATTTGC
ATCGGCTCTG CGCAGGTTCC GAAGCAGATC GATGTCGCTT CGATTGCCGG TTGGGAAGAA
GCCTTCTTCT CGTCGGCCTT CACGCATCCA AACCGCGGCG CCCAACGCGT CAAGTTCGAA
AGAGGTGTGT ACGCCTTCTG GAAGGAGATG CTCGATGGCA ACTTTGCCGA GTACCCGAAG
GAAGTGCTCA TTCCGTTGAA GAAATCGCTC GGTGATCTCA TCGCCGGCAA AGTTGGAGGT
TGA
 
Protein sequence
MAKILTASRS HDVALQGAIL LYGPAEGQFT YSTAHRITHE AGTRKPAIGP GVPLNRRALI 
HAVTQVALSA LPKGEFLTPN VLSVSTRAVT WWCPPAIRRV FFQCKELGTR SAVVPHPGLV
FQAANDGFSV FALMEDVRPT PESMLHEPPY FNTWDVGRIC IGSAQVPKQI DVASIAGWEE
AFFSSAFTHP NRGAQRVKFE RGVYAFWKEM LDGNFAEYPK EVLIPLKKSL GDLIAGKVGG