Gene Rpic_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1577 
Symbol 
ID6289084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1665986 
End bp1667665 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content60% 
IMG OID642625142 
Producthypothetical protein 
Protein accessionYP_001899148 
Protein GI187928661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCA TAAACGCGTT CCCCAAAAGC GAGGACCTTT GGCGCGTGGA CTGGTTCGGT 
CCCATCGCCT TTCCCGATCG CATGGTGCGG CGGCGCCATC CGTCCGTGCT GGTCTCGCTG
TCCAAAGGCA ACGGCCGGGA CACTTCCGCT CGCCTATCGC TTCCCTCGCT CCGTCACGCG
GAAAGACAGT CAACCCGATG CTGGGTTTCA GTCGGAACCG CGATGCTCTT GCGCATCGGC
GACCAGTGGC GCGAGCAGGC CCTGGAATCC CGTGCGGCAG ACGAAGAGTT GCTCTGTGAG
GATCTGGAGA TCAGCCGAGA CACCTGCGAG CTTGTAAAGG CGGGATCGAG CTTCGAGGAT
GGCGGCTTCA TGTTGCCACT TCACGAGCAT GCGGGGCATC GCGAGAACAC GCACTCCTAT
TGCGTCCGGG TCACTCTCCC GAACGGCAAG CTACTTGTCG TCCCCTGCAT GGAGTTGATC
CGCTTCTACT TTGGGTCGTC CAGCGAACTG CTGAATAGGC TGTTCTCTCC CCAACTCCGG
AAAGAGCATC TCTACACGGG GATGACAATC GATCGGCACA ACCGGATGAC GCTCCAGCTG
GCAGACCGCA TTCCGCGTGC GAGCGCCGAA GACATCGCGC GAATTGCCGG CGGCCGCCTC
GCATGGCATG CGGCCGCAAT GATCGGTGCA TCCTGTGCTC GAGCTGCACA AGCGCGGCAG
GAGATCTATC CGCAGACCCT CTTTCCGTTC GAAGGAACGA CAACGCTGCG AGCCTCCGGG
AAGTGGCTAT CGCGCGGCAA CGATCAGAAA GGAACGTTTC TCGTCTATCA GCTGCTGAGT
TGCTCGCACC CTTTCCCCTT CAAATCATTG CGATTCCGTG TGACCGGCAC AAGGAAGAAT
CTCGGCAGCA AGGTAGCGCC CGAGACCCCG CCGCAGGCTA CAGTCCCATC AGCTCGAAAA
CCCAAGGAAC CCTCCAAAGT CAGCCTGGAA GAGCATGACC CTTCATCGCA GCTTGCTCCG
GCTACGATGC CTATGCGCGG CAATCGGCGG TTCGTCGACC TAGAGAACAA GTGGGTCTTC
GCGGACCGCG CCATTGGTGG ACAGAAACCT CGTACCACTA CCTCGTCCGG CGAACCCATC
AGCGAGCATG CGATTGGCGA GCCGGGCTCC ACGAAGCGCA TCCGAGAAGC GCAAATCGTC
GATGGCGACA ACGAGGTTCC GGACCCACCG GCATTCTTGG CGCACGCAGT CAAAGCGCTA
TCTGGGCTGA ACGACGCGTC CGTGCGCGTC CTGACGGCAA GCCGCGACGA CGGGTGGTCT
GTCCCCATGC CACTAATCGC GGACGAGGAC GGGGTACTGG ACGAACATCT GCTGGTTCCG
GATGACGAAA ACCGGATGAA GCGCGTAGCA GCATTCGCTG TTTCATCAAA GGAAGCATCC
ACCTTGCTCA TGGTTCACGA GGCCAGCCCA CCTGTTTCAT TCGCGGTGCC CCTGGCGAAC
AAGAGTGACG AAGCGATTCA ACATGCGATT CAGGCGGCGA CGGGGGCGTT TATCTCGGTG
CAGAATGGAA CTGGTTATCA GGTGATGGCC TTGGAGCACA CTCAGGTCAG TGCCCCTGAC
GAGTTACGCT CCTGGATCTC AATGCAGCTG TACCACGCGG CCATCGCGTA TCTGCGCTGA
 
Protein sequence
MLRINAFPKS EDLWRVDWFG PIAFPDRMVR RRHPSVLVSL SKGNGRDTSA RLSLPSLRHA 
ERQSTRCWVS VGTAMLLRIG DQWREQALES RAADEELLCE DLEISRDTCE LVKAGSSFED
GGFMLPLHEH AGHRENTHSY CVRVTLPNGK LLVVPCMELI RFYFGSSSEL LNRLFSPQLR
KEHLYTGMTI DRHNRMTLQL ADRIPRASAE DIARIAGGRL AWHAAAMIGA SCARAAQARQ
EIYPQTLFPF EGTTTLRASG KWLSRGNDQK GTFLVYQLLS CSHPFPFKSL RFRVTGTRKN
LGSKVAPETP PQATVPSARK PKEPSKVSLE EHDPSSQLAP ATMPMRGNRR FVDLENKWVF
ADRAIGGQKP RTTTSSGEPI SEHAIGEPGS TKRIREAQIV DGDNEVPDPP AFLAHAVKAL
SGLNDASVRV LTASRDDGWS VPMPLIADED GVLDEHLLVP DDENRMKRVA AFAVSSKEAS
TLLMVHEASP PVSFAVPLAN KSDEAIQHAI QAATGAFISV QNGTGYQVMA LEHTQVSAPD
ELRSWISMQL YHAAIAYLR