| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1522 |
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| Symbol | |
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| ID | 6289223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1614519 |
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| End bp | 1616966 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642625087 |
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| Product | type IV secretory pathway VirB4 components-like protein |
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| Protein accession | YP_001899093 |
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| Protein GI | 187928606 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA AAAAACGGCC CATCCAGGAA ATCGCTCCCT GGCTCACCTT TATCACGCCC
TCGCTGGTGC TCGGCAAGGA TGGCAGTTTG CTGGCCACCT ACGGGCTGGG GGGCGTTGAC
GCGGACCACC CCAACAAGAG TGAGATCACA TCCGCTCGGG ATCAGCTCGA TCAGGCCTGC
CGCAGCCTGG ACGGTCGCAT CACTGCGTGG TGGCGCATCA AGCACCGCCG CGCACACGAC
TACATCGCCG GCGAGTTCGC CAGTGCTCAT GACGCCAAGA TCGACGAGCT CAATCGGGCC
AACATGTCAT CGGGCAAGTT CTACCAGAAC ACGCACTCGC TCGCGCTCAG CTACACGCCC
GCATCCGGCC TGGACAAGAT CTTCGAAAAG ATCAGCTACC ACGTCACGGT GGGCGGCAAG
GGGCTGGTCG CGGCGTTATT CGAGTCGCTA AAGGACACGT TCCTCGCGCG CAACGCGTTC
GCATTCGATC TTGCCAAGAC GCAGGCCGAT GCCAAGCGCT TCGAAGGCAT GCTCGATGCG
TTTGTTGGCG GCAACACCAA GATCGGGCTC AAACGGCAGA TGCTGCAGGA GTCCATGGCA
CTTCTGCATC AAGCGGCGAA CCCATCGGTG CCGCCACGCA GGATTCGCTT CCCGATGACG
CTGCTGGACA CCCACCTCAC CGAGTCGATC GTGACGCCGG GTGCCGAGCA ACTGCTCTTT
GAGTCGGCGC ATGGAATGCG CTACGCGGCC GTGGTCGCCG TCAAGGAATG GCTCGGCTTC
CAAGAAGCGG CGCTGGACGT CCTGACGAAG CTCGATGTTG AGCTGGACGT CTGCGTCCTC
TACCGCTTCT TGGACAACTC CAAGGCCAAC GTCTACATCG AGAAGATCCG CAGCTTCTAC
AAGATGGCGA GCTTCAACCT GTGGAAGATT CTGAAGCAGT TCGCTGCCAA GGAAGAACAG
GAGAACGATG AGGGCCGGGA ACAGCTCGCC GACGAGGCGG GTCAGGCACT TCGCCGGCTG
ACCGCGGATG GTCAGCAGCA TGGCTTCGCC AACATCTCCG TCATCGTCTA CGGCAACACC
GAAGAGGAAT GCTCGGACGC GGTCAGTCTG GTCGTTGGCG CCATCAGTAA CGCGGGGTTC
GGCACGATTC GTGAAGGTAC GAACCTGATG CCCGCCTGGA ACTGCACGCT GCCCGGTCGT
TGGGACAACC AGCGGCGCCT GCAATTTGTC GAAACACCGG CCGTGTCGGA CGTCGCCCCG
ATTTGTACGA TCAATCCGGG GCCGACCCGC AACGACTGGC TCTCGGACAA GGCCGGCAAG
GAGATGCCAC CACTCACCTG CTTGCCGACA CGCCACCTGA CTGCCCAGCG CGTCGACATG
CACGAGCCCG GGGGCAATGG CCACCTCTTC GTGATCGGCC CGATCGGTGC CGGTAAGTCG
GTATTCCTGA ATTTCCTCAT GTCACAGTCG GGGCGCCATA ACCCCCGGCG CATCCGGTTT
GATAAGGACC GGTCGACACG CATCACCACG CAACTCGGTG GTGGTCAATT CATCGATGTC
ACCGGTAAGT TTGCGACCGC CACACGCTGC AACCCGCTGT CCCTGCTCGG CGAGGCGGAG
AACCACGCCT ACGTGACGGA ATGGCTGATC TTGGCCATCG AGGACGAAGA CGGATTCAGG
CTCACCCCCA CACAGAAGAC GGACATCTTC GACGCGGTTC AGATTCTGGC CGGCTATAGC
CGCGAGCAAT GGACCCTGTC CTTCTTCGCC ACACTGATCC ACGCCGATCT GCGCGAGCGG
CTGCAGCTCT GGATGAAGGG TGGTCAGTAC GGTGACTTCT TCGACAACGT CGACGACGCG
TTCCAAATCA GCGATGACCT GACCATCGAG ATGGGTGAGC TGCTCATCAA CTACGAGCGC
GCGGCGGTTC TATTCCTAGA CTACGCCTTC TTCCGGATCA GCAAGAGCAT GGATGGTCAG
CGATTCACGC TGATCGAGAT TGAAGAGGCG GGCTTCTTCT TCAAGTACGA ACGCTTCTAC
AGGCGCTTGG AAACGTGGCT GACCACCATC CGCAAGCTCA ACGGTGCCGT GTGGATGGCA
ACACAGTCGC TGCGCCAGAT CGCGCGGATT ACCGACTTCG AGGTGCTGAA GGAAACCATC
GCGAACTTCA TCTACCTGCC CAACAGCCTC GCCAATACCA GCAAGAACCT GTACTGCGAC
ACGTTCGGCC TGACCGTCGA CCAGGTGCAA ATGATCAACG ACGCCGTGCC GAACCGCGAC
TACCTGTGGG TCACCCGGAC CACGTCGCGC ATGCTCCAGA CGGACTTCAA GCCTGAGATG
GTTGCCCGGC TGCGCTCCGA CGGCAAGGCG CAAGCGGTTT TCGACAAGCA CTACATGCAG
GGCGATGGCT GGGAGGACCG CTACGTGCGT GAACTTCTGG CCGCCTAA
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| Protein sequence | MLKKKRPIQE IAPWLTFITP SLVLGKDGSL LATYGLGGVD ADHPNKSEIT SARDQLDQAC
RSLDGRITAW WRIKHRRAHD YIAGEFASAH DAKIDELNRA NMSSGKFYQN THSLALSYTP
ASGLDKIFEK ISYHVTVGGK GLVAALFESL KDTFLARNAF AFDLAKTQAD AKRFEGMLDA
FVGGNTKIGL KRQMLQESMA LLHQAANPSV PPRRIRFPMT LLDTHLTESI VTPGAEQLLF
ESAHGMRYAA VVAVKEWLGF QEAALDVLTK LDVELDVCVL YRFLDNSKAN VYIEKIRSFY
KMASFNLWKI LKQFAAKEEQ ENDEGREQLA DEAGQALRRL TADGQQHGFA NISVIVYGNT
EEECSDAVSL VVGAISNAGF GTIREGTNLM PAWNCTLPGR WDNQRRLQFV ETPAVSDVAP
ICTINPGPTR NDWLSDKAGK EMPPLTCLPT RHLTAQRVDM HEPGGNGHLF VIGPIGAGKS
VFLNFLMSQS GRHNPRRIRF DKDRSTRITT QLGGGQFIDV TGKFATATRC NPLSLLGEAE
NHAYVTEWLI LAIEDEDGFR LTPTQKTDIF DAVQILAGYS REQWTLSFFA TLIHADLRER
LQLWMKGGQY GDFFDNVDDA FQISDDLTIE MGELLINYER AAVLFLDYAF FRISKSMDGQ
RFTLIEIEEA GFFFKYERFY RRLETWLTTI RKLNGAVWMA TQSLRQIARI TDFEVLKETI
ANFIYLPNSL ANTSKNLYCD TFGLTVDQVQ MINDAVPNRD YLWVTRTTSR MLQTDFKPEM
VARLRSDGKA QAVFDKHYMQ GDGWEDRYVR ELLAA
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