Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1475 |
Symbol | |
ID | 6287529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1566489 |
End bp | 1567382 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642625040 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_001899046 |
Protein GI | 187928559 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.027912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000000119497 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACACGA GACACACACT CGCTTCCACG CTTGTCGTGG CGGGTCTAAC GGTGGCGGCG CAGGGCATCC ACGCCCAGAC GCTGGAAAAG GTCGCTGCAG CAGGCAAGAT CACGGTTGGT TACCGTGAAG CGGCGGTTCC GTTCAGCTAC TTGCTGGCCC CGAACAAGGC GGTCGGATTT TCCGTCGACC TGACGCAAGC CATCGTCGAC GATGTGCGCG CCCGGCTGAA GAAGCCGTCT CTGCAGGTCG ACGCGATTCC GGTGACCGGC ACGAATCGGA TCCCGCTGCT GGTGAACGGC ACCTACGACC TCGAATGCGG ATCGACCACC AACACCAGCG CGCGCGGCAA GGACGTGGCC TTCTCGATCA ATTTCTTCTA CGCGGGAACG CGCCTCTTGA CCAAGCGCGA TTCGGGCATC AAAAACTACC CGGACCTGGC CGGCAAGACC GTCGCGAGCA CGGCAGGCAG CACGAACGAA AAGGTGCTCA AGAAGTTTGC CGTAGAACAC AACATCGACG TCCAGATCAT TTCCGGCAAG GACTACGCAG ACGCGTTGAA GCTCGTCGAA ACCGGCCGAG CGACGGCATT GGCGCTCGAT GACGTGCTGC TGTACGGCCT GCGTGCCAAT TCTGCAAATC CCGCTGCGCT GGAAGTCGTG GCGGAAACCC TGCAGGTCGA GCCGTACGCC TGCATGGTTC GCAAGGACGA CCCCGCCTTC AAGCGGCTCG TGGATGCGAC CATCACACGG CTCATGAAAT CCGGCGAATT CACCGCGCTG TACAAGAAAT GGTTCGAGTC GCCCATCCCG CCGGCCGGTG CAAACCTCGA CATGCCGATG AGCGATGCAC TGCGCGCCAA CCTGAAAAAG CGTAGCGATA AGCCGGCGCA GTGA
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Protein sequence | MNTRHTLAST LVVAGLTVAA QGIHAQTLEK VAAAGKITVG YREAAVPFSY LLAPNKAVGF SVDLTQAIVD DVRARLKKPS LQVDAIPVTG TNRIPLLVNG TYDLECGSTT NTSARGKDVA FSINFFYAGT RLLTKRDSGI KNYPDLAGKT VASTAGSTNE KVLKKFAVEH NIDVQIISGK DYADALKLVE TGRATALALD DVLLYGLRAN SANPAALEVV AETLQVEPYA CMVRKDDPAF KRLVDATITR LMKSGEFTAL YKKWFESPIP PAGANLDMPM SDALRANLKK RSDKPAQ
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