| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1447 |
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| Symbol | |
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| ID | 6286244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1535391 |
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| End bp | 1537472 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642625014 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001899020 |
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| Protein GI | 187928533 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.16655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00919085 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGCGG AGTACAAGGT CCAGGACGGC GTTGCCGTCA TCACGCTCAG CAACCCGCCC
GTCAACGGCC TTGGCCACTC CACGCGCCTG GGCATCGTTG AAGGCATGGT GAAAGCGGGC
GACGACGCCA ACGTCAAGGC CATCGTGATC ACCGGTGCGG GCAAGGCCTT CTCGGGCGGC
GCCGATATCC GCGAGTTCAA CACGCCCAAG GCCACGCAAG AGCCGACGCT GCACGCTGTC
ATCAAGGCAG TCGAGTCGAG CAGCAAGCCG GTCGTGGCGG CCATCCATTC GGTGGCGATG
GGCGGCGGGC TGGAACTGGC GATGGGCTGC CATTTCCGCG TGGCCGCACC AGGCGCACAA
ATTGCGCTTC CCGAGGTCAA GCTGGGGATT CTGCCGGGCG CGGGCGGTAC GCAACGCCTG
CCGCGCGCAA TCGGCCTGGA GCCGGCGCTG AACATGATCG TTTCCGGCAA CGCCATCCCG
TCGGAAAAGC TCGCCAAGAG CGGTCTGTTC GACCAGATGA TCGAAGGTGA CCTGATGGCC
GGTGCCATCG ATTTCGCACT GAAGGCCGCA GCCGAGGGCA AGCTGCCGAA GCTGCGCGAT
CGCAAGGTCG AGCACGACAA TCCGCAAGGT TTCCTGCAAT TTGCGCGCAA CACCGTCGCG
GCCGTCGCCA AGAACTTCCC GGCGCCGGGC AAGTGCGTTG ACGCCGTGCA GGCCGCCGTG
GAAAAGCGTT TTGACGACGG CATCAAGTTT GAACGCGACC TGTTCATCGA ACTGGTGAAT
ACGTCCAAAT CGCGCGCACT GCGCCACGCC TTCTTTGGTG AACGCGCTGC AAGCAAGATC
CCCGATGTGC CGGAAGATAC GCCAGTGCGC AAGGTGGAGA AGGTTGCCGT GATCGGCGCT
GGCACGATGG GCGGCGGCAT CTCGATGAAC TTCCTCAACG CAGGCATTCC GGTCACGATG
CTGGAAACCA AGCAGGAAGC GCTGGACCGC GGCGTCGCCA CCATCCGCAA GAACTACGAG
AACAGCGCCA AGAAGGGCAA GCTCACGCAA GAGAAGGTCG AGCAGCGCAT GGCCCTGCTG
ACCCCGACGC TGTCCTACGA CGACATCAAG GATGCTGACC TCGTCATCGA GGCCGTCTTT
GAAGAAATGG GCGTCAAGGA AGTCGTGTTC AAGAAGCTGG ACGAAGTCGT CAAGCAGGGC
GCAATCCTGG CGTCGAACAC CTCCACGCTG GACGTCGACA AGATCGCCAG CTTCACCAAG
CGCCCGCAAG ACGTTGTCGG CATGCACTTC TTCAGCCCGG CCAACGTGAT GAAGTTGCTG
GAAGTCGTGC GCGGCAAGGA CACCGCCAAG GACGTGCTGG CCACCGTCAT GAAGCTGGCC
AAGGCCATCA AGAAGACGGC CGTTGTTTCC GGCGTGTGTG ACGGCTTCAT CGGCAACCGC
ATGATCGAGC AGTACAGCCG CCAGGCCGGC TACCTGCTGG ACGAAGGCGC GCTGCCCGAG
CAGGTCGACA AGGCCATCGA GAAGTTCGGC TTTGCCATGG GCCCGTTCCG CATGGGCGAT
CTGGCCGGCA ACGACATCGG CTGGGCCATC CGCAAGCGCC GCGCCGTGGA CAAGCCGGAC
ATCGTCTATT CGAAGACCGC CGATCTGCTG TGCGAGATGG GCCGCTTTGG TCAGAAGACC
GGCGGCGGCT GGTACGACTA CAAGGCGGGC GACCGCAAGC CGTATCCGAA CCAGCAGGTC
AACGACATGA TCGTCCAGCA CTCGAAGGAT CTGGGCATCA CGCGCCGCAA GATTTCGGAC
GAGGAAATCG TCGAGCGCCT GGTGTTCGCG CTGGTCAACG AAGGCGCGAA GATCCTGGAA
GAGGGCATTG CCTCCAAGGC TTCCGACATC GACATGGTGT ACCTGACCGG CTACGGCTTC
CCGCTGTTCC GCGGTGGCCC GATGCTCTAC GCAGACACGG TCGGCCTGTA CAACGTCGCG
CAAGCCATGC ACCGCTACAG CAAGGGCTAC CACGGTGAAG CGTGGAAGGT TGCCCCGCTG
CTGCAGAAGC TGGCCGATGA AGGCAAGGGC TTTAATGGCT GA
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| Protein sequence | MTAEYKVQDG VAVITLSNPP VNGLGHSTRL GIVEGMVKAG DDANVKAIVI TGAGKAFSGG
ADIREFNTPK ATQEPTLHAV IKAVESSSKP VVAAIHSVAM GGGLELAMGC HFRVAAPGAQ
IALPEVKLGI LPGAGGTQRL PRAIGLEPAL NMIVSGNAIP SEKLAKSGLF DQMIEGDLMA
GAIDFALKAA AEGKLPKLRD RKVEHDNPQG FLQFARNTVA AVAKNFPAPG KCVDAVQAAV
EKRFDDGIKF ERDLFIELVN TSKSRALRHA FFGERAASKI PDVPEDTPVR KVEKVAVIGA
GTMGGGISMN FLNAGIPVTM LETKQEALDR GVATIRKNYE NSAKKGKLTQ EKVEQRMALL
TPTLSYDDIK DADLVIEAVF EEMGVKEVVF KKLDEVVKQG AILASNTSTL DVDKIASFTK
RPQDVVGMHF FSPANVMKLL EVVRGKDTAK DVLATVMKLA KAIKKTAVVS GVCDGFIGNR
MIEQYSRQAG YLLDEGALPE QVDKAIEKFG FAMGPFRMGD LAGNDIGWAI RKRRAVDKPD
IVYSKTADLL CEMGRFGQKT GGGWYDYKAG DRKPYPNQQV NDMIVQHSKD LGITRRKISD
EEIVERLVFA LVNEGAKILE EGIASKASDI DMVYLTGYGF PLFRGGPMLY ADTVGLYNVA
QAMHRYSKGY HGEAWKVAPL LQKLADEGKG FNG
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