Gene Rpic_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1420 
Symbol 
ID6288483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1509896 
End bp1511200 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content67% 
IMG OID642624987 
Productprotein of unknown function DUF323 
Protein accessionYP_001898993 
Protein GI187928506 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.350616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTAT CGCCTGTATT TGATGTGCCG ACCACCGCCC TGCCCGCGCT GATGCAGCAC 
TACGGCATGG TGCGAGCGCA ATCCCTGGCC TTGACGGCGC AGTTGTCCGA CGCCGATGCC
ACCGTCCAGT CCATGGACGA CGCCAGCCCC GCCAAATGGC ACTTGGCCCA TACGACGTGG
TTCTTCGAGG AGTTCATCCT TGGCCCCAAC GTGCCGGACT ATCGCTCACC CGATGCTCGC
TACCGTTACC TGTTCAATTC GTACTACGAA ACGGTCGGTG CGCGGCACCC GCGCCCGCGC
CGGGGCATGC TCACGCGCCC CACGCTCGAC GAGGTGCGCG CCTACCGCGC CCATGTCGAT
GCGGCCATGC AGCGCTTGCT GGCCGGCGGC GTATCGGACG ATCTTGCCCG TCTGGTGACC
CTCGGCCTGC ACCACGAACA GCAGCACCAG GAGTTGCTGC TGACCGATCT TCTCCACCTG
TTTGCGCAGA ACCCGTTGTG CCCGGCCTAT GCCCAAGCGC CCGTAGCACG CGTGCACGCG
GCCCCGGTGC AACCGGGTTG GGTCAGCTTC CAGGGCGGCG CCGTACAGAT CGGCAGAACC
GATACGGGAA CCGATACTGA CTTCATGTTC GACTGCGAAG GCCCGCGTCA CACCGTGTGG
CTGGAGGCGT ATGCGCTGGC CACGCACCCT GTCACCAACC GCGAGTGGCT CGCCTTCATG
CAGGACGGCG GCTATTGCCA GCCAACGTTG TGGCTGGCCG ACGGCTGGGC GTGGGTGCAG
CGGGAAGGCA TTGACGCCCC GCTCTACTGG CGCGCCGGCA TGGATGAGGC TGAAGGCTGG
CAGCAGATGT CGCTGCACGG CCTGCAGCCG GTCGATCTGG ACGCGCCGGT CACGCACGTC
AGCTTTTACG AGGCCGATGC CTACGCCCGC TGGGCCGGCG CCCGCCTGCC GACGGAAGCC
GAATGGGAGC ACGCCGCCGA AGGCCTGCCC GTGCAAGGCA ACTTCGCCGG CCGCGGCGCG
CTACGCCCGC TTCCCGACCA CGGCATCGCC CAGGCCGGCA GCCTGCGTCA ATTGTTCGGT
GATGTGTGGG AATGGACCGC CAGCCCTTAT GGCCCGTATC CGGGCTTCGA GCCGGCCGAG
GGCGCCGTGG GCGAATACAA CGGCAAGTTC ATGTGCAGCC AGATGGTGCT GCGCGGTGGA
TCGTGCGTGT CGCCCGAGGG GCATCTGCGG GCGACGTATC GCAACTTCTT CTATCCGCAC
CAACGGTGGC AGTTCACCGG AGTGCGGCTG GCGCGGCGGG CGTGA
 
Protein sequence
MRVSPVFDVP TTALPALMQH YGMVRAQSLA LTAQLSDADA TVQSMDDASP AKWHLAHTTW 
FFEEFILGPN VPDYRSPDAR YRYLFNSYYE TVGARHPRPR RGMLTRPTLD EVRAYRAHVD
AAMQRLLAGG VSDDLARLVT LGLHHEQQHQ ELLLTDLLHL FAQNPLCPAY AQAPVARVHA
APVQPGWVSF QGGAVQIGRT DTGTDTDFMF DCEGPRHTVW LEAYALATHP VTNREWLAFM
QDGGYCQPTL WLADGWAWVQ REGIDAPLYW RAGMDEAEGW QQMSLHGLQP VDLDAPVTHV
SFYEADAYAR WAGARLPTEA EWEHAAEGLP VQGNFAGRGA LRPLPDHGIA QAGSLRQLFG
DVWEWTASPY GPYPGFEPAE GAVGEYNGKF MCSQMVLRGG SCVSPEGHLR ATYRNFFYPH
QRWQFTGVRL ARRA