Gene Rpic_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1354 
Symbol 
ID6288339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1451064 
End bp1451591 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content66% 
IMG OID642624922 
Product(2Fe-2S)-binding domain protein 
Protein accessionYP_001898928 
Protein GI187928441 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.193865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0619689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCA GCCTCAAGCT GTCGGTCAAC GGTGCGCCTG TCACCGTCAG TGTCGAACCC 
CATACCCTGC TAGTTCAATT GTTGCGCGAG CACCTTCGCC TGACCGGCAC GCACGTCGGC
TGCGATACGG CGCAATGCGG TGCCTGCACC GTGCATATGA ACGGGCGGGC GGTGAAGTCC
TGCAACATCC TGGCCGTGCA GGCCGACGGC GCCGAGGTGA CAACCATTGA AGGCCTGTCG
AAAGATGGTG CGCTGCACCC GATGCAGGAA GCCTTTCGCC AATGCCATGG CCTGCAATGC
GGCTTCTGTA CCCCGGGCAT GGTGATGGCG GCCACGGCGC TGGTTGCGCA ACACCCGCAT
CCCGACGAGC ACACGGTGCG CGAGCAGCTC GACGGCAACC TGTGCCGCTG CACGGGTTAT
CACAACATCG TGCGCGCCGT CATGCACGGA GCCGAAGCCA TGGCCGAAGC CCAGGGCGAC
GATGCCTCGC TGCAAAGCCT GGCCGCGGCG CGGGCCCACG CCGCCTGA
 
Protein sequence
MAISLKLSVN GAPVTVSVEP HTLLVQLLRE HLRLTGTHVG CDTAQCGACT VHMNGRAVKS 
CNILAVQADG AEVTTIEGLS KDGALHPMQE AFRQCHGLQC GFCTPGMVMA ATALVAQHPH
PDEHTVREQL DGNLCRCTGY HNIVRAVMHG AEAMAEAQGD DASLQSLAAA RAHAA