Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1346 |
Symbol | |
ID | 6286117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1441735 |
End bp | 1442457 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642624914 |
Product | MgtC/SapB transporter |
Protein accession | YP_001898920 |
Protein GI | 187928433 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.340819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0449923 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGC AAGCCCTCGT CCACCTCAAT GTCGCCACGC TGGTGGATTC CTTCATCAGC CTTGCCTCGG CCTTTGCGCT GGGCTCACTC ATCGGCTTTG AACGGCAGGT GAGGCAGCGG ACTGCGGGGC TGCGCACCAA TGCGCTGGTG GCCGTGGCCG CATCGGCGTT TGTCGACATG GCCGCGCAGA TCGGCACCGC ATCGGACACC ACCCGCGTGA TTGCCTATGT GGTGTCGGGC GTAGGCTTTC TGGGTGCCGG TACCATCATG AAGGAAGGGC TGAACGTGCG CGGGCTGAAC ACCGCCGCCA CGCTCTGGGG CTCCGCCGCC GTGGGTGCGG CGACCGGCTC CGATCTCATT GGGCAGGCCA TTCTCATTAC GCTGTTCGTG CTGGCCTCGA ACATCCTGCT GCGGCCGGTG GTGGACCGCA TCAACCGCAC GCCGTTGGAC AATCAGGCGA GCGAAGTCAC GTACACGATG TGCGTCATCT CGACCAGCGA ACGCCAGAAG GAGGCGCTGG CCGACCTGGA ACGCCTGCTG GAAGAGGCCA GCTATCCAAT CAGCGATCTA TCGGTCGAAC CCTTTGGCGA CGACCATGTG GAAATTGAAG CCATGCTGAT GTCGACCGCC GTGAACGCGG CCGAACTGGA CCGCATCGTC GCGTCGCTGC AATCGCAGCC GCACGTGGCG CAGGCATTCT GGAACCCAAG TACGACGGAG TAA
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Protein sequence | MTLQALVHLN VATLVDSFIS LASAFALGSL IGFERQVRQR TAGLRTNALV AVAASAFVDM AAQIGTASDT TRVIAYVVSG VGFLGAGTIM KEGLNVRGLN TAATLWGSAA VGAATGSDLI GQAILITLFV LASNILLRPV VDRINRTPLD NQASEVTYTM CVISTSERQK EALADLERLL EEASYPISDL SVEPFGDDHV EIEAMLMSTA VNAAELDRIV ASLQSQPHVA QAFWNPSTTE
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