Gene Rpic_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1341 
Symbol 
ID6286084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1435603 
End bp1436850 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content66% 
IMG OID642624910 
Producthypothetical protein 
Protein accessionYP_001898916 
Protein GI187928429 
COG category[S] Function unknown 
COG ID[COG4320] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.101093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAA CCACCCGTAT CCTTCTTGAA TACAACGCTG GGCGTGATCC GGAAAGGCTC 
ACCCGAAAAC TGGATGCCAT TGCCGCCGAC CCGTTTTCAT TCTTTCGCGG CACCAACAAC
CTGTACGCCG CGTCGCTGGC CGATGCTGCC TTGCTGCACG ACGCACCCCG CACGCTGGTC
TGCGGCGACC TCCACCTTGA AAACTTCGGC AGCTTCAAGG GCGACAACGG CCTGGTCTAC
TTCGACATGA ACGACTTTGA CGAAGCCCTC GCCGCGCCGT TTACGGTCGA CCTGGTGCGC
GTGCTGTCGA GCCTGCAGGT TGCCGCCTAT GGCTGGAAAC TGGCCGACGA AGATGCCAAC
AACCTGTGCC GCCGCTTTCT GGACACGTAC GCCGCGGCGC TGGTCGATGG CAAGCCGCGC
TGGGTGGAGC GCGCCACCGC CACCGGTATC GTGCGCGACC TGCTGCGCGG CCTGCGCAAG
CGCAATCGCG CCGCCTACCT CGCGCAACGC ACCGAGCGCG ATGGCAACCA AATCCACCTG
CGCATCGACG GCCGCCACAC CTTGCGGGCT AGCAAGGATG AGGCCCGCCG CGCACGCCGC
ATCCTGCAGG CCTATGGCGA GCAGGGCAAT GGCACCAGCA GGGGTAGCCA CAACCAGCGC
TTTATCGCCA TCGATGTGGC GCGGCGCATT GCCGGCACCG GCAGTCTGGG GCTGGAGCGC
TATTCCGTGC TTGCGCGCCC GGAGAACGAC CCCGCCACGC TGCGGCTGAT CGACATCAAG
CTTTCCATTC CGAGCGTCTG GGCCGATACG CTCGGCAACG CGTGCAGCGT GGCACCGTGG
CACAGCGAAG CCGGCCGCGT GGTGGACATT CAGCGCCTGT CGCAGGCCAT CTCGCCGGCG
CTGCTGCGTG GCGTCGTTTA CGGGGCCAAG GGCGAGAAGC CCAAGTCGTA CGTTGTCAAA
AGCCTGCAGC CGACCGCGGA CCGTGTGGCG CTTGGCTCCG GCAAGAACGT GGTCGCCAAT
CTGGACGATG CGCTGCAGAC CATGGCGCAC GTGGCGGCCT GGTGCCATCT GCGCGGCTGT
GGCCGCCACG GGACGGATCT CGTGGAAAAG GTGCAGGACT ACGCGGCCGG CACGGCGTGG
CGCAAATCGG CGCTGAAGCT GGCGGCGCAC GGCCGCAAGG TGTCGTTGAA GCAATGGGCC
GAGTTTGCTG AGGACTACCG CGAGGCGCGT GGTGACAAGG CCGCTTAA
 
Protein sequence
MHETTRILLE YNAGRDPERL TRKLDAIAAD PFSFFRGTNN LYAASLADAA LLHDAPRTLV 
CGDLHLENFG SFKGDNGLVY FDMNDFDEAL AAPFTVDLVR VLSSLQVAAY GWKLADEDAN
NLCRRFLDTY AAALVDGKPR WVERATATGI VRDLLRGLRK RNRAAYLAQR TERDGNQIHL
RIDGRHTLRA SKDEARRARR ILQAYGEQGN GTSRGSHNQR FIAIDVARRI AGTGSLGLER
YSVLARPEND PATLRLIDIK LSIPSVWADT LGNACSVAPW HSEAGRVVDI QRLSQAISPA
LLRGVVYGAK GEKPKSYVVK SLQPTADRVA LGSGKNVVAN LDDALQTMAH VAAWCHLRGC
GRHGTDLVEK VQDYAAGTAW RKSALKLAAH GRKVSLKQWA EFAEDYREAR GDKAA