Gene Rpic_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1323 
Symbol 
ID6286094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1416669 
End bp1417571 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID642624892 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001898898 
Protein GI187928411 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCA TTACGTCAGC CGAGGTGTTC GTGGCGATCG TCGAGCACGG CAGCCTGAGT 
GCGGCCGCCG AAGGGCTCGA CATGTCGCGC GCGATGGTCA CGCGTTATCT GGCACAAATG
GAGGCATGGT CCGGCGCGCG GCTGCTGCAT CGGACCACGC GCCGCATCGG CCTGACACCC
GCCGGCGAGG CCACGCTTGC ACGCTGCCGC CAGATGCTGG AAATCGCTTC GCAGATGGCC
GTGTCAGAAG GCCCTGAAGC CGATACGCCG CGCGGGCTAC TGCGCATTGC CTGCGCGCAG
TCCCTGGCGC AGCAGACGTT GAGCGCGGCG GTGACGGCCT ACCTGCGGCG CTATCCGCAA
ACGGCGGTCG ATCTGGTAGT CGATAACCGC ACTATCAACC TCGTGGAAGA GCGCATCGAC
CTGGCCGTGC GCATTACCAA CGATCTTGAC CCGAACCTGA TCGCGCGGCC GCTGGGCATG
TGCGAATCGG TCGTGGTGGC GGCGCCGTCT TACCTGGCCG CGCATGGCAC GCCGCGTCGC
GTACAAGACC TGGCCGTTCA CAACTGCCTG ACGTATTCGT ACTTCGGCAA AAGCCTGTGG
AAGTTCACCG AGGCGAAGAC GGGTGCGCCG ACGGACGTGC CGGTGGGCGG CAATCTCAGC
GCGAATGAAT CGATGGTGTT GCTGGCAGCG GCGCGAGAGG GCGCGGGGAT TGCGTTGCAG
CCGGTGTTTG CTGCCGCGCC GCTGATCGCC AGCGGGCAAC TCGTGCGTTT GTTGCCTGAC
TACGTGCCGC AGGCGCTGGG CATTCACGGC GTGTACAGCT CGCGCAGGCA GATGCCGTCG
GCGCTGCGGG CCATGCTGGA TTTTCTGGTG GACTGGTTTA GGGTGCAGCC GAACGTTACG
TGA
 
Protein sequence
MDRITSAEVF VAIVEHGSLS AAAEGLDMSR AMVTRYLAQM EAWSGARLLH RTTRRIGLTP 
AGEATLARCR QMLEIASQMA VSEGPEADTP RGLLRIACAQ SLAQQTLSAA VTAYLRRYPQ
TAVDLVVDNR TINLVEERID LAVRITNDLD PNLIARPLGM CESVVVAAPS YLAAHGTPRR
VQDLAVHNCL TYSYFGKSLW KFTEAKTGAP TDVPVGGNLS ANESMVLLAA AREGAGIALQ
PVFAAAPLIA SGQLVRLLPD YVPQALGIHG VYSSRRQMPS ALRAMLDFLV DWFRVQPNVT