| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1318 |
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| Symbol | |
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| ID | 6289175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1412771 |
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| End bp | 1413520 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624887 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_001898893 |
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| Protein GI | 187928406 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00387688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.761807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGC CGCTTTCCGG CACTGGTGAA TTCGCCCAGC GCGACACCGC GCAGCATCCG
CCCGCACTGA CCCCCGGCTA CAAGACCAGC GTGCTGCGCT CGCCGCGCAA CGCGCTCATC
TCCACCCTGA ATACGCTGTC CGAGACCACC GCACCGGTGT TCCATGCCGA CGATCTCGGC
GTGCTCGACA ACGATCTGAT CCTCAACTAC GCCAAGGAGG GCCTGCCGAT CGGCGAGCGC
ATCATCGTCC ACGGCTACGT GCGCGACGAG TTCGGCCGCC CCGTGCCGAA CGCGCTGGTG
GAGGTGTGGC AGGCCAACGC CGGCGGCCGC TATCGCCACA AGAAAGACCA GTACATCGCG
CCGATCGACC CGAACTTTGG CGGCTGCGGC CGCATGCTGA CGAACGCCAA CGGCTACTAC
GTCTATCGCA CGATCAAGCC CGGCCCGTAT CCGTGGCGCA ATCGCATCAA CGATTGGCGC
CCGTCGCACA TCCATTACTC GCTCTCGGGC GATGGCTGGG CCCAGCGCCT CATCACGCAG
ATGTACTTCG AGGGCGATCC GATGATCGCG CAGTGCCCGA TCATCAAGAC CATCCCGAGC
GAAGAGCAGG TGCGTGGTCT GATCGCGCTG CACGACACGG CGAACCACGT GCCGCTCGAC
AGCCGCTGCT ACCGCTTCGA CATCACGCTG CGCGGCCGCC GTGCCACGCA TTTCGAAAAC
GCCGTGCCCG CCCTGCAAGG AGCCAAGTGA
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| Protein sequence | MTLPLSGTGE FAQRDTAQHP PALTPGYKTS VLRSPRNALI STLNTLSETT APVFHADDLG
VLDNDLILNY AKEGLPIGER IIVHGYVRDE FGRPVPNALV EVWQANAGGR YRHKKDQYIA
PIDPNFGGCG RMLTNANGYY VYRTIKPGPY PWRNRINDWR PSHIHYSLSG DGWAQRLITQ
MYFEGDPMIA QCPIIKTIPS EEQVRGLIAL HDTANHVPLD SRCYRFDITL RGRRATHFEN
AVPALQGAK
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