Gene Rpic_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1300 
Symbol 
ID6286956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1397549 
End bp1398475 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content61% 
IMG OID642624870 
Productband 7 protein 
Protein accessionYP_001898876 
Protein GI187928389 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAGC TGGGGACTCT CGCGATCATC GTCCTGTTTG CCGCCATCGT GCTCATTGCA 
CAAGGCGTCA AGATCGTGCC GCAACAGCAC GCCTGGATTC TGGAGCGGCT GGGCAAGTAT
CACGCAACGC TCTCGCCGGG GCTCAATATC GTGCTGCCCT TTGTTGATCG CGTGGCTTAC
AAGCACGTGC TCAAGGAAAT CCCGCTCGAC GTGCCGAGCC AGATCTGTAT CACCAAGGAC
AACACGCAGC TGCAGGTGGA CGGCATCCTG TACTTCCAGG TGACCGACCC GATGCGGGCA
TCGTATGGCT CCAGCAATTT CGTGATCGCC ATCACCCAGC TGGCGCAGAC GACGCTGCGC
TCGGTGGTCG GCAAGCTCGA ACTGGACAAG ACGTTCGAAG AGCGTGACTT CATCAACCAC
AGCGTGGTCA ATGCGCTGGA TGAGGCGGCA TCGAACTGGG GGGTGAAGGT GCTGCGCTAC
GAAATCAAGG ATCTGACCCC GCCGAAGGAA ATCCTGCACG CCATGCAGGC GCAGATCACG
GCCGAACGCG AAAAGCGTGC GCTGATCGCC GCATCCGAAG GCAAGCGCCA GGAGCAGATC
AACCTGGCAT CCGGTGCGCG CGAGGCCGCC ATCCAGAAAT CGGAAGGGGA AAGGCAGGCT
GCCATCAACA AGGCGCAGGG CGAAGCGGCG GCGATTCTGG CGGTGGCCGA AGCGAACGCC
CAGGCGATCC AGAAGATCGG TCAGGCCATT CGCACCGAGG GCGGTGTCGA TGCCGTCAAC
CTGAAAGTGG CGGAAGAGTA TGTGAGCGCG TTCGGCAACC TGGCCAAGCA GGGCAACACG
CTCATCGTGC CGGGGAACAT GGGCGACCTG AGCACGATGA TTGCGTCAGC GTTGACGATC
GTGAAGCAGC AGCGGCCGAG CGCGTAA
 
Protein sequence
MFELGTLAII VLFAAIVLIA QGVKIVPQQH AWILERLGKY HATLSPGLNI VLPFVDRVAY 
KHVLKEIPLD VPSQICITKD NTQLQVDGIL YFQVTDPMRA SYGSSNFVIA ITQLAQTTLR
SVVGKLELDK TFEERDFINH SVVNALDEAA SNWGVKVLRY EIKDLTPPKE ILHAMQAQIT
AEREKRALIA ASEGKRQEQI NLASGAREAA IQKSEGERQA AINKAQGEAA AILAVAEANA
QAIQKIGQAI RTEGGVDAVN LKVAEEYVSA FGNLAKQGNT LIVPGNMGDL STMIASALTI
VKQQRPSA