Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1284 |
Symbol | |
ID | 6289310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1378882 |
End bp | 1380072 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642624854 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_001898860 |
Protein GI | 187928373 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.168651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.194237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGTT TGACCGTTCT TGGCGCCACT GGCTCCATTG GCGACAGCAC GCTCGACGTG GTGCGCCGTC ATCCCGACAA ATACAGCGTT TTTGCGCTGA CCGCCAACGC GCAGGCCGAC AAGCTCGCGG TGCTCTGCCG TGAGTTTCGC CCGAAGATGG CGGTGCTCGG TTCGGCGGCT GCGGCGGATG CATTGCGTGA CCAACTGGGC ACAGAAGCTG CCGGCATCGA AATCTGTTCT GGCACCAAGG CGCTGGAAGA GGCCGCCGCC CACCCTGACT GCGATGCCGT GATGGCCGCC ATCGTTGGGG CGGCAGGTTT GCGCCCGACG CTTGCCGCCG TGCGCGCCGG CAAGCGCGTG CTCCTGGCCA ACAAGGAGGC GCTGGTGATG TCCGGCGCGC TCTTCATGGA CGCCGTGCGT GAGCATGGCG CCACCGTGCT CCCGATCGAC AGCGAGCACA ACGCCATCTT CCAATGCCTT CCTCAGCAAG TTCCGCAGTT CGGGCGCGGC GTGTCGCGCA TCGTCCTGAC GGCATCAGGT GGTCCGTTCC GTACGCGTGC CGTTGATTCG CTTGCTGATG TCACGCCCGA TCAGGCTTGC GCGCATCCGA ACTGGGTGAT GGGGCGCAAG ATCTCCGTTG ACTCCGCCAC CATGATGAAC AAGGGGCTGG AGGTGATCGA GGCGTACTGG CTGTTTGGCG TGCCGGTCGA GCATCTCGAA GTGCTGATCC ACCCGCAGAG TGTCATCCAT TCGATGGTCG GCTACGACGA TGGCTCCGTG CTGGCGCAGC TGGGCAATCC GGACATGCGC ACGCCGATTG CCTACGGCTT GGCCTACCCT GAGCGCATTG AGGCCGGTGT TCCGCTGCTC GATCTCGTGA CCACAGGTGC ACTGACGTTC GAGGCGCCGG ATCTGCGCCG CTTCCCGTGT CTGGCGCTGG CCTTTGATGC ACTGCGCGCC GGTGGTACGG CACCTGCTGC TCTGAACGCG GCCAACGAGG TGGCTGTCGA AGCATTTTTA CAGCGCCGCA TCCGGTTCAC CGAGATTGCT GCCGTGGTGG GTGACACGCT CGCCCGTACT TCTATCGTGC CCGCCGACTC GCTCGACACC GTATTTGCGG CCGACGCCCA AGCGCGTCAG CAGGCGGAGC GCTATATCGC GACCGCATGC GCGCAACTGC CGGCCGCCTG A
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Protein sequence | MMRLTVLGAT GSIGDSTLDV VRRHPDKYSV FALTANAQAD KLAVLCREFR PKMAVLGSAA AADALRDQLG TEAAGIEICS GTKALEEAAA HPDCDAVMAA IVGAAGLRPT LAAVRAGKRV LLANKEALVM SGALFMDAVR EHGATVLPID SEHNAIFQCL PQQVPQFGRG VSRIVLTASG GPFRTRAVDS LADVTPDQAC AHPNWVMGRK ISVDSATMMN KGLEVIEAYW LFGVPVEHLE VLIHPQSVIH SMVGYDDGSV LAQLGNPDMR TPIAYGLAYP ERIEAGVPLL DLVTTGALTF EAPDLRRFPC LALAFDALRA GGTAPAALNA ANEVAVEAFL QRRIRFTEIA AVVGDTLART SIVPADSLDT VFAADAQARQ QAERYIATAC AQLPAA
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