Gene Rpic_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1278 
SymbolrpsB 
ID6289424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1373604 
End bp1374347 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content60% 
IMG OID642624848 
Product30S ribosomal protein S2 
Protein accessionYP_001898854 
Protein GI187928367 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.235139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.160579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGA CCATGCGCGA AATGCTGGAA GCCGGTGTCC ACTTTGGCCA CCAGACCCGC 
TTCTGGAACC CCAAGATGGC CCCCTTCATC TTCGGCCATC GCAACAAGAT TCACATCATC
AACCTGGAAA AGACGCTGCC GATGTACCAG GACGCACTGA AGTACGTGCG CCAACTGGCA
GCCAACCGGG GCACCATCCT GTTCGTCGGC ACGAAGCGCC AATCGCGTGA GATCCTGGCT
GAAGAAGCGG CTCGCGCAGG TATGCCGTTC GTTGACAGCC GCTGGCTCGG CGGCATGCTG
ACCAACTTCA AGACGGTCAA GACCTCGATC AAGCGCCTGA AGGACATGGA AGTCGCCAAG
GAAGCCGGCG CGACCGAAAC CATGAGCAAG AAGGAAGCGC TGATGTTCGA ACGCGAAATG
GACAAGCTGG TGAAGTCCAT TGGCGGCATC AAGGACATGG GCGGCATTCC AGACGCCATC
TTCGTGGTGG ACGTTGGCTA CCACAAGATT GCCGTGACCG AAGCCGCCAA GCTGGGCATT
CCGGTGATCG GCGTGGTTGA CACGAACCAC TCGCCGGAAG GCATCGACTA CGTCATCCCG
GGTAACGACG ACTCGAGCAA GGCTGTTGCT CTGTACGTGC GCGGCGTGGC CGACGCGATC
CTGGAAGGCC GCGCCAACGC GGTCCAGGAA GTGGTTGAAG CCGCTCGCGG CGGTGATGAC
TTCGTCGAAG TCCAAGAAGG CTAA
 
Protein sequence
MSVTMREMLE AGVHFGHQTR FWNPKMAPFI FGHRNKIHII NLEKTLPMYQ DALKYVRQLA 
ANRGTILFVG TKRQSREILA EEAARAGMPF VDSRWLGGML TNFKTVKTSI KRLKDMEVAK
EAGATETMSK KEALMFEREM DKLVKSIGGI KDMGGIPDAI FVVDVGYHKI AVTEAAKLGI
PVIGVVDTNH SPEGIDYVIP GNDDSSKAVA LYVRGVADAI LEGRANAVQE VVEAARGGDD
FVEVQEG