Gene Rpic_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1269 
Symbol 
ID6287366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1357473 
End bp1358519 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content65% 
IMG OID642624839 
Productalpha/beta hydrolase fold 
Protein accessionYP_001898845 
Protein GI187928358 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.331641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0800465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCTTC GTTCGATTTT CATCGCGCTG ACGTTTGCGC TCTCGACGTT CGCAACGGCC 
CCGCACGCCG CTTCCGCAGA GACAGGCCCC GCGTATGGCC CGCGCCTGGA AGGCTTCGAT
TACCCGGCGC CGGTCAAGCT CTTCAAGTTC GAGTCGCAGG GCAACGCGCT GGAGATGGCG
TATCTGGACG TCGCGCCCAA GCAGCCCAAC GGCCAGGTGG CGGTGCTGCT GCACGGCAAG
AACTTCTGCG CGGCCACCTG GGAAGGCACG ATCGCCGCAC TGACCGGTGC CGGCTACCGC
GTGATCGCCC CGGATCAGAT CGGCTTCTGC AAATCGAGCA AGCCGCGCGC GTATCAGTAC
ACGTTCCAGC AACTGGCGAG CAATACGCAT GCGCTGCTGG CGTCGCTTGG GATCGGGCAG
GCCATCCTGA TCGGCCATTC GACGGGCGGC ATGCTGGCGG CGCGTTACGC GCTGATGTAT
CCGAACGCGG TGTCGCGGCT GGTGATGATC AACCCGATCG GCCTGGAAGA CTGGAAGGCC
GAGGGCGTGC CGTCCATGAC GGTCGACCAG TGGTTCGCGC GTGAAAAGCA AACCACCGCC
GAGCGCATCC GTGCCTATGA GCAGTCCACG TACTACGCCG GGCAATGGCG CGCGCAATAC
GAACCGTGGG TGCAGATGCT GGCCGGCATG TACCGCGGCC CGGGGCGCGA TCTGGTGGCG
TGGAATTCCG CGCTGCTGTA CGACATGATC TATACGCAGC CTGTCGTCTA TGAGTTTGGC
CAGTTGCGCC CGTGGACGCT GCTGCTCATC GGTCAGAAAG ACACCACCGC CATCGGCAAG
GACGCCGCAC CGCCGGAAGC GCGGGCACAG CTGGGGCATT ACCCCGAACT TGGCCGTGCA
GCCGCCAAGG CTATCCCGCG CGCGACGTTG GTGGAATTCC CGGATGCGGG CCATGCGCCA
CAAATCCAGG ATCCTGATGC GCTGCACCAT GCGCTGCTCG GATGGCTGGC CACGGCGGAG
CCTTCGCGCA CACGCCGGCC GGACTGA
 
Protein sequence
MWLRSIFIAL TFALSTFATA PHAASAETGP AYGPRLEGFD YPAPVKLFKF ESQGNALEMA 
YLDVAPKQPN GQVAVLLHGK NFCAATWEGT IAALTGAGYR VIAPDQIGFC KSSKPRAYQY
TFQQLASNTH ALLASLGIGQ AILIGHSTGG MLAARYALMY PNAVSRLVMI NPIGLEDWKA
EGVPSMTVDQ WFAREKQTTA ERIRAYEQST YYAGQWRAQY EPWVQMLAGM YRGPGRDLVA
WNSALLYDMI YTQPVVYEFG QLRPWTLLLI GQKDTTAIGK DAAPPEARAQ LGHYPELGRA
AAKAIPRATL VEFPDAGHAP QIQDPDALHH ALLGWLATAE PSRTRRPD