Gene Rpic_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1224 
Symbol 
ID6289717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1312507 
End bp1313466 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content66% 
IMG OID642624794 
Producttranscriptional regulator CysB-like protein 
Protein accessionYP_001898800 
Protein GI187928313 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.178615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.191747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCC AACAACTGCG TTCCATCCGT GAGGCGGTGC GCCGCCAGTT CAACCTGACT 
GAAGTCGCCA ACGCGCTGTA CACGTCGCAG CCCGGCGTGT CGCGCCAGAT TCGCGAGCTG
GAGGATGAAC TGGGCGTGGA GATTTTCGAG CGCTATGGCA AGCGCCTGAC GGGCCTGACC
GAGCCGGGCC GCGAGATCGT CCGCATTGTC GAGCGGTTGT TGCTGGAAGC GGAAAACCTG
CGCCAGGCCG GCGAGGAATT CTCGGGCCGA CAATCCGGCC GCCTGACCGT GGCGACGACG
CACACGCAAG CGCGCTATGC GCTGCCCAAG GTGGTGCAGT CGTTCCGCAA GGAGTATCCG
CACGTCACGC TGGCGCTGCA GGAAGCGTCG CCTTCGCACA TCGTCGAGCT GTTGCTGACA
GGGCAGGCCG ATATCGGCAT CGCCACCGAG GCGGTGGCCA ACGAGCCGGG GCTGACGTCG
TTCGAGGCGT ACCGCTGGCG CCACGTGCTG GTGGTCAGCC CGGACCATCC GCTGACCAAG
AACCCGCTTC CCACGCTCGA AGACGTGGCG CAGTATCCGC TCATCACGTA CGACGCGGGC
TTCACGGGCC GACGCAACAT CGACGCGGCA TTTGGCAGCG CCGGCCTGCA TCCCGAGATC
GTGCTGACCG CCATGGACGC CGACGTGATC AAGACCTATG TGGCGCTGGA CGTGGGCGTG
GGCATCATCG CGTCGATGGC GTATGACGGG CGCAAGGACG ACAACCTTGT CTGCATCGGC
GCGGACCATC TGTTCGAGCC GAATACCACG CGTGTGGCGG TGCGCCGTGG CGCGTACCTG
CGTGGCTATG CGCATGATTT CATCGGGATG TTCGCGCCGC ATCTGTCGCG CGAAACGGTT
GCCGAGGCGG TGGCTTCCAC GGTGGTGACG CAATCCGCGC GGGAGGCGCT GGCGGCGTAA
 
Protein sequence
MNFQQLRSIR EAVRRQFNLT EVANALYTSQ PGVSRQIREL EDELGVEIFE RYGKRLTGLT 
EPGREIVRIV ERLLLEAENL RQAGEEFSGR QSGRLTVATT HTQARYALPK VVQSFRKEYP
HVTLALQEAS PSHIVELLLT GQADIGIATE AVANEPGLTS FEAYRWRHVL VVSPDHPLTK
NPLPTLEDVA QYPLITYDAG FTGRRNIDAA FGSAGLHPEI VLTAMDADVI KTYVALDVGV
GIIASMAYDG RKDDNLVCIG ADHLFEPNTT RVAVRRGAYL RGYAHDFIGM FAPHLSRETV
AEAVASTVVT QSAREALAA