Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1209 |
Symbol | |
ID | 6286451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1295507 |
End bp | 1297684 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642624779 |
Product | putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane |
Protein accession | YP_001898785 |
Protein GI | 187928298 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.104805 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAA CCCGAACGGC GCGCCTGCGA AGGCACGTCT CGCCAAGCAA CCTCATCGCT GTCGGAGCCG TGCTGCTGGC CGGCTGCGGC GTGTTGAGCG CCTGCGGCGG CAGCAATGAC GGCAACAACG TGCCGGGCAA TACCAAGCCC GCCTTTGCCG GCAAGGTGAC CATCAACCGG TACGACGGCA TATCAGACGA CCTGCTGACC GCCGGCCTGG GCGCAAGCGG CCTGGCTTCG GCCACTGCGC CCGCCATCGC CAACCCCACG GCGCCCACGG CAGCCGAGCT GCGCCGCCTG GCGATCTACG CCAACTACCG TGCGCTGGTC GACACGGCGG CCAAGGGCGG CTACGGCACG CTCTATGGCC CGAACGTCGA TGCCAGCGGC AACGTCACGC AGGGCTCCGG CATGATCCCC GGCACCGAAT ACGTGACGTA CTCCGACGAC GGCACAGGGC AGCAGAACGT CGTGCTGCTC GTGCAGATTC CGGACAGCTT CGACGTCAAC AACCCCTGCA TCATCACCGC CACCTCGTCG GGCTCGCGCG GCATCTATGG CGCGATTTCC ACCGGCGAGT GGGGCCTCAA GCGCAAGTGC GCCGTTGCTT ATACCGACAA GGGCACCGGC GCCGGGCCGC ACGACCTGGC TACGGACACC GTCGCCCTGC AGGACGGCAC GCGCACCACG CGCAGCGCAG CCGGGTCGAA CGCGCACTTT GCTGCGCCGC TCACCAGCAG CCAGTTGGCT GCCTTCAATT CGGCCACGCC GAACCGGCTG GCGTTCAAGC ATGCGCATTC GCAGCGCAAC CCAGAGAAGG ATTGGGGCTT GTTCACGCTG CAGGCCGTGC AGTTCGCGTT CTGGGCGATC AACGACAAGA TCGCTGGGAC GAGCGGTGCG CTGGTCGGCA GCGCACTGCC GGTCCGTCCG GACAACACCA TCGTCATCGC GTCGAGCATC TCCAACGGCG GCGGGGCGGC CATCGCGGCG GCAGAGCAGG ACACCGGCGG GTGGATCGAC GGGGTGGCCG TCGGCGAGCC CGGCCTGAAC CTGCCGCCCA ACACCGGTGT GCAGGTCGTG CGCGGCGGCA CCACGCTGCC GACGACTGGC AAACCGCTGT TCGACTACGT GAGCTATGCC AATGTATTCC GGCTGTGCGC GGCGTCGTCT GCGAGCGTTG CCACCGCACC CGCGCAGGCG TTCTTTACGA GCCTCACGAC GTTCCCGGCA GGCGTGCAGG CCAATCGCTG CGCCGCGCTC AAGGCGGCTG GGCTGCTGAC GTCCACCACG GCGGCTGCCC AGGCCGACGA AGCGCTGCAG AAGATGCGCA CCTACGGCTG GGAACCGGAG TCGGACCTGG TGCATGCGTC AATGTCGTTC TACGAGATCG ACCCATCGGT GTCGACCACA TTTGGCAACG CGCTTTCTCG CGCCAGCGTG ACCGACAACC TGTGCGGGCT GAGTTTCGCG GCAACCGACG CGTCGTTCCA TCCGACGGCG GTGAACGCCA CGGCGCTTGC GCAGATGGCG GCGGTTGGCA ACGGCATTCC GCCCACCTCC GGCGTGCAAC TCGTCAACAA CAACGCCCAG GGCGGCCCGA CGCGCAGCAA CCAATCGGTC GACTCCACCG GCACGCAGGC CGCCAACCTC GATGGCGCGC TTTGCCTGCG CAACCTGTTG ACGGGCGCCG ATGCCGCTTC ACAGTCGCTG CAGGCCGGCA TCAGCCAGAC GTTGCGCACC GGCAACCTGC AGGGCAAGCC GGCGTTGATC GTGCAGGGCC GCAACGACGC GCTGCTGCCG GTCAACCATG GTTCGCGGCC TTACCTGGGG CTGAACGCCA GGGTGGAGGG CGGCTCGAGC AAGCTGTCGT ATATCGAGGT GATGAACGCG CAGCATTTCG ATGGCTTCAT CGACCTCGTG CCTGGTTACG ACACGCTCTT CGTGCCGCTG GTGCTGTATG AGCAGCGCGC GCTGGACGCC ATGTACGCCA ACCTGAAGAA CGGCACGCCG CTGCCGCCTT CACAGGTGGT GCGCACCACT CCGCGCGGTG GTACGCCCGG TGCTGCACCG GCCATCAACG CGGCCAACGT GCCGAACTTC ACGAGCACAC CGGCCGCGGG CGACCGCATC TCGGTGACTG TGTCGGGCGG CGTTGCGACG GTATCGGTGC CCAACTGA
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Protein sequence | MKPTRTARLR RHVSPSNLIA VGAVLLAGCG VLSACGGSND GNNVPGNTKP AFAGKVTINR YDGISDDLLT AGLGASGLAS ATAPAIANPT APTAAELRRL AIYANYRALV DTAAKGGYGT LYGPNVDASG NVTQGSGMIP GTEYVTYSDD GTGQQNVVLL VQIPDSFDVN NPCIITATSS GSRGIYGAIS TGEWGLKRKC AVAYTDKGTG AGPHDLATDT VALQDGTRTT RSAAGSNAHF AAPLTSSQLA AFNSATPNRL AFKHAHSQRN PEKDWGLFTL QAVQFAFWAI NDKIAGTSGA LVGSALPVRP DNTIVIASSI SNGGGAAIAA AEQDTGGWID GVAVGEPGLN LPPNTGVQVV RGGTTLPTTG KPLFDYVSYA NVFRLCAASS ASVATAPAQA FFTSLTTFPA GVQANRCAAL KAAGLLTSTT AAAQADEALQ KMRTYGWEPE SDLVHASMSF YEIDPSVSTT FGNALSRASV TDNLCGLSFA ATDASFHPTA VNATALAQMA AVGNGIPPTS GVQLVNNNAQ GGPTRSNQSV DSTGTQAANL DGALCLRNLL TGADAASQSL QAGISQTLRT GNLQGKPALI VQGRNDALLP VNHGSRPYLG LNARVEGGSS KLSYIEVMNA QHFDGFIDLV PGYDTLFVPL VLYEQRALDA MYANLKNGTP LPPSQVVRTT PRGGTPGAAP AINAANVPNF TSTPAAGDRI SVTVSGGVAT VSVPN
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