Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1146 |
Symbol | |
ID | 6288443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1220370 |
End bp | 1228040 |
Gene Length | 7671 bp |
Protein Length | 2556 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642624717 |
Product | Beta-ketoacyl synthase |
Protein accession | YP_001898724 |
Protein GI | 187928237 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | [TIGR00517] acyl carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGATG CAATAGCTAT TGTCGGAATG TCGTGTCGGT TTCCGGGCGG TGTTCACAGC CCGGAGGATT ATTGGAAGCT CCTGGTTGCT GAAACCGACG CCGTGACCGA AGTGCCGGCG GACCGCTTCA GTACCGAGTT TTATCAACAC CCCTCCAAGC GTGAGCCCGG CAAGAGCTAT ACTTTTGCGG CCGGCGTCAT CGACAACGTC GCGGGCTTTG ATGCCGACTT CTTTGGCATC TCGCCGCGCG AAGCGCAGCA GATGGATCCT CAGCAGCGCC TGCTCCTCGA ACTGGCCTGG GAAGCCTTCG AACATGCAGG GCACCACCCC CAACAGATGG CGGGCCAGAA CTGCGCAGTG TTCGTCGGGG TGGCGGCGCA GGACTATGGC GACCGGGGCG TCGACGACCT CAGCGTGGTG GACGCCTACT CCGCCACCGG CAATACGCTG AGCATCGCCT CCAACCGCAT CTCGTATCTG TTCGACCTGC GCGGGCCGAG CATGTCGATC GACACCGCAT GCTCGTCGTC GCTGGTGGCA CTGCACCAGG CATGCAACGC GATCCGAGCC GGAGAGGTGG AAACGGCGCT GGCAGGCGGC GTCAATCTGC TGCTGCACCC GTTCCCCTTT GTCAGCTTCG CCAAAGCCTC GATGCTGTCG CCCACCGGCC GCTGCCGCGC TTTCGATGCT TCTGGCGACG GTTATGTGCG TGCCGAAGGC GGCGCGCTGG TGCTGCTCAA GTCGCTGTCC AAGGCGCTGG CCGACGGTGA CACCATCCAT GCCGTGATCG CGTCGTCGGG GGTCAACTCC GATGGCCACT CGCAAGGCGG CATCAATGTG CCGGCGTCGG CCACGCAAGC GGCGCTGCTG GAAAACGTGT ACGCCCGCGC CGGGGTCGAT CCGCGCGAAG TGGACTATCT GGAGGCGCAC GGCACCGGCA CCGCAGTCGG AGACCCAATC GAGACGCGCG CGCTGATCGA CGTGATTGGC AAGCTGCGCA GCCCCGATGC GCCGTTGCTA ATCGGCTCGG CCAAGACCAA TGTCGGGCAT CTGGAAACGG CGTCCGGCAT GGCTGGTCTG ATCAAGGCAA TCCTGTGCCT GAAACATCGC GCGGTGCCAG CGTCGATCCA CTTCCGCACG CCGAACCCCA ATATCGACTT CACGGGTGGC AACCTGCGTG TGGTCGATCG CTACACACCG TTGGCGGCCA AGGACAAGCG CCTGCTTGTC GGCGTAAATT CGTTTGGTTT TGGCGGCACC AATGCGCACG TTCTGCTGCG CGAAGCCGCG CCGCCTTCCA AAGCAGCAAA AGCCGGCAAG GCGATCAGCG TTGCGCAAAA CCGCCCCGCC CCGTTGATGC TCAGCGCGCG TTCGCAAGAA GCGCTGCAGG CGCTGGCCGC CGCCTATCGG GACCAACTCG GCGCAGGCAC GTCCTGGCAG GCGCTGGCAG GCGCGACGGC TCATCGCCGA CAGCCCTTAC GCTACCGCGC CGTCATCGAC CCATCTAACG CTGCAGACGT TGCCGCAGAT GGCATCGCGG CGCTGGCTGC GCTGGCGCAA GGCGACACCT GCCCCGCTGT GGTGACGGGC GAGGCCGTCG CCAACGACGG CAAGCTGGCG CTGGTGTTCT CCGGCAATGG CTCTCAGTGG GCCGGCATGG GGCAGCGCCT GCTGCAGGAG GACAGTGTCT TCTGCGCAAC CGTAAAGCAG ATCGATGCCT TCTGGTGCGC CGACGGCAGC GCATCGCTGC TCGATGTGAT GCGTGCAGGC GCCACCGCGG AGTGGCTGCA GCGCACGGAA AACGCGCAGC CACTGCTGTT TGCCATACAG GCGGGCATCG TGCAATCGCT GCTCGAGCAG GGCCTGCGCT TTGACGCATG CTATGGCCAT AGCGTGGGCG AAGTCGCGGC GGCGTATGCC GCGGGCGCCT TGTCGATGGA GCAGGCCGTG CGCGTCATCA AGGTTCGCAG CCGCGCCCAG GCGCTCACCG CTGGCAAAGG CAAGATGGCC GCTGCAGGCG TGGGGGAAGG GGCCGCGCGC GAACTGATCG CCGCGTTGGG CCTTGACGAC GTGTTGGAAG TCGCCGGCAT CAACAGCCCC GGCGCCGTCA CGCTGGCCGG CCCCCTCACG GCACTGGAAG CCGTGCAGGC GCATTTGGCG CAGGCAAATC AGTTCTTCCA GATGCTCGAT CTAGACTACG CCTTCCACAG TCGGCAAATG GATGCCATCC ATGATGTTGT GGTGGAAGGT CTGCGAGGCC TGCAACCGCG GGCAACGCAC AGCACTTTTG TCTCAACGGT GACCGGCACG CCGCTGTCGG GCGCCGAACT GGACGCCAGC TATTGGTGGC GCAATATCCG CGAGCCTGTC CAGTTCGAGC CGGCCACGCG CCAGCTGATC GATGGCGGCA TGCGGCTGTT CCTGGAAATC GGGCCGCACT CGATCCTGCG CGCCTACGTG TCGCAATCAT TGGAGGCGGC ACGCGCGAAC GGCAGCGCCC TGCCAACGCT CAAGCGCAAC CACGACCAGA GCAGCCAGCT GCGCCACGCG TTCTGCACGG CGCTCGCACA CGGCGCGCGG CTGGATCGCA ATACCGTCTA CCCCGACGCA CACCGCGACG TCGTGCTGCC GACCTATCCG TGGCAGCGCA CGCCCTACTG GGCCCCCATC ACCGCAGAAG GCTACGACCT GGTCCACCGC CACCGCCAGC ACCCGCTGCT TGGCTACCGG CTGAAGGACT GCGCGGCAGC CTGGGAAAAC CAGATCGACC CAGTCAAGCT CCCCATGCTC GCCAGCCACG TGGTGGACGG GGCTGTCACC TTTCCTGGGG CGGGTTACGC GGAGATGGCG CTGGCTGCGG CGCGCAGCTA CTTCGGTACC GTGACTTGCG CGGTGGAGAA TCTGGAGATT CGCACCCCGG TGGTATTCCA ACCGCAGCAG GGCCGACTGT TCCGCTTTAC GCTCGATCCG CGCACTGCGG GTTTCGTGAT CGAAACGCGC CCACGCGTGA GCGACGATCC CTGGACCATC AATGTGGCCG GTCGCTTGCT GATCGGCGGC CCGTCGCAGA CCGCGCCGGC CATCGAGCCG CAAAGCATGG CTGCGCTCGA AGAGCAGGCC CCCATTGCCG GCAGCACGCT GTACCAGGCG GCACTCGCGA TCGGCTTGGA GTTTGGCGAG GCCTTCCGCT GGGTGCAGAC GGTCCGCATC GACGGTGACG TTGCACTCGC TGAGCTTGCA GCGCCCGCCT CGCAGCAGGC TCATCTGGAT CGCTACACGA TGCATCCGGG CGCGCTCGAC AGCGGCCTGC ATCCGCTGCT GGCCCTGATG GCCGCCGGCA AGCCCAGTGC TGAGCAGGCC GCCTACGTAC CGGTGCAGTT TGGCCGCATG GATTACTTTG GCGGCGTGCC GGCCCGCGTG GTGGCGCGGA TCGAACGCCG CAGTCCGCAT TCGTTGGTCG CCAATTTCCA ATACCTGGAT GCCGGCGGCA ATACAGTGCT GAAGCTCTCC GCATGCCGCT TCCGCCGCGT AGATCTGATC CGCCGTCGCC ACGGCAAACC TGGGCGCTAT GTCTTTGCGC TGGAAGCCAA GCCGGCAACC GAAGCGATTG CTGCGGCTGC GACGCCTTCG CCGGCCAGCC TGTTGGCCAC GGCAGCCACC ATGGTCGCCG GCACCGAAGA CGCCGCGCAT CGCGACAGGC ACCTCACCGA AGTCATGCCG CTGATCGACG TGCTGGCTGC GGCCTACGCG TTGCGTGCCG TCGAAGCGCT GCACGTCCGC GCCAAGGCCG AGCTGCCGGC CTGCGCGAAT CCAGCACTGC TCGCACGGCT AGTCGACATG TTGCTGGAAG ACGGCATCCT CGTGCGCCGC GACGGCGTGC TGGCACTGGA CGACGAAACG CTGCCGCCTA TCGAAGAACT CTGGCGGAGC CTGCTATCCC TGTCGCCCAG CCATGTGGCC GAGCTGACGC TGCTGGCACA TTGCGGCGCC TCGCTGCCGG CCATTCTGAA CGGCGAGCTG GAAGCTGGCG CCGTGCTGCC CCCGGCGCGC AACAGCCTGC TGGACCATCT GTTCGAGGCC TCCCCGACGT GGTCGCATGT CAACGCAATG GCCAGTGCTA GCCTGGATGC GTGCATCGAG AGATGGACCC AGCGCCGCCC GATGCGGGTT CTGGAAATCG TCCCGCCGGA AGCCAATCTA TTCGAGCCGA TCGGCGCGCA CCTGCAGGGC CGCTGCGAGT ACACCATCGC CGGCAGCCCC GAGCAGCTCG GCGCCTTTGA TACCGGCCGT CATCCGCTAA TCCGCACGGC GACGCTACAA CTGAGCGATC AGCCCGAGTT GACCGTCGAG CCGGGACGCA GCCACACGTT CGATGTGGTG GTGGTCAATA ACCTGCTGCG CACATCTGGC AAGCCGAATC GATTGCTGGC GGCCGTGCGC ACGTGGATGA CGCCTGGGGC ACTGCTGGTG CTTAGCGAGG CCCAGCCAAG CCGTTTCTCC GACATTGTGT TCGGTTTGTC GCCGGAATGG TGGTCCGCAG GTCGTGGGGA TTTGCTCCCC GCCGAGTCCA TCGAAGCCAT GCTGCTTGCC GAGGGCTTCC AGTCACCAGC CCGCCACGTC GAGGCTGATC TCCAGATTGA AGGCGCACCG GCGCTGCTGC TGGCGCGCCG CCAGCTTGGA CGTCAAGCCG ATTCATGCGA TATCGGCGAG ATCGTCACAG AAGGAATTGA CGGCAACGCC GAGCAATTGG GGGCGAACTG GCTGGTGGTC TGTCCTGGCA CACCGGCCGA ACTCGCCACC ACGCTGGCTG CCGCGCTCGA AGAGGCCCTT GCTGGCGCAA GCCTAGCGAG CCGCAGCCCG CGCGTTGCGT TGGTGGAGTC CCCCGAAGCG GCGCTGGCGC ATGCCGCACT GGACGAAGCG GGAGCACCGT GCCAGATCGT CTTCCTTGCT GCAGACGCGC CAAGGCTTGA CGATAGCGCC GACGCGGGCA CGCTGATGCA GGCGCAAGAG CCGACTTCAG TCGCGCTAGC ACGTTTAGTG CGCGGCTTGA GCGGTAAGCG CGCCAGCGCG CAACTGTCGA TCGTCACCTG CGGCGGCGCG CCGCTGGCTG CGCCCGGCAC GCCAGCAATG GCGCTGCAGC CGTCGCAGGC CACCCTGTGG GGTCTGGGCC GCGTGCTGAT GAACGAGCAC GCCGAACTGC ATTGCAGGCT CATCGATATC GATCCACGCG AGACGCAGCC AGTACCGGCG CTCAGCCGTG AGCTGCTATG TGCCGATGCG GAAGATGAAG TCGTGCTCGG CCTCGAAGAA CGCTACGTGC CGCGCATGCT GACCGCCGAA GTGAGCGAGC TGCGCGAACA GGCCACACGG GCCGCCGCAG GTGCATCGGC CATACCCGCT GTGCTCGGCT TTGAATCGCC GGGCTCACTG AGTCACCTGC AGTGGTTCCC GCTGCCCGAG TTCGAGCTGG AACCCGACGA AGTCGAAGTG GAGCCGATGG CCGCGGGCCT GAATTTCCGT GACGTGATGT ACGCGATGGG CCTGTTGTCT GACGAAGCCG TCGAGAACGG TTTTGCCGGT CCGACCATCG GCATGGAGTT CTCCGGCCGC GTCACGCGTG TGGGCAGTGC GGTCGCGAAT TTCGCCAGCG GCGATCTGGT GCTCGGTTTT GCCCCCGCGT GTTATGCGAG CCGGTTGCGT ACCCGCGCGA CGGCGCTGGC ACACAAACCC GCGCGGCTGA GCTTTGAGGA AGCCGCCACG ATCCCGACCA CGTTCTTCAC CGCCTATTAC GGGCTCAACG AACTGGCGCG CATTCGCAAG GGCGAGCGCG TACTGGTGCA TGGCGCGGCC GGCGGTGTCG GCATCGCTGC AATCCAGTTG GCACGCCACC TCGGTGCCGA AGTATTCGCC ACCGCAAGTA GCAATGAAAA GCGCGAGTTT GTACGCCTGC TCGGCGCAAG CCGCGTGTTC GACTCACGCA GCCTGGCATT CGCCGACGAG ATCCGGCGCG CGACCGGAGG CGAAGGTGTC GATGTCGTGC TCAACTCGCT CGCCGGCGAG GCGATGGTGC GCAGCATCGA CGTGCTACGT CCGTTCGGTC GCTTCCTCGA GCTCGGCAAG CGCGATTTCT ACGAGAACAG CCGTATCGGC CTGCGCCCGT TCCGCAACAA CATCAGCTAT TTCGGCATCG ACGCCGACCA GTTGATGGAT GCGTCGCCGC AGCTCACCGC ATCCCTGTTC GCCCAGGTGA TGGCGCTGCT CGATCAGGGC GTGCTCGATC CGCTGCCCTA CCGCGCGTTC CCTGCCGCAC GCATCGAGGA AGCCTTCCGC TACATGCAGC AGGCCCGCCA GATCGGCAAG ATCGTGGTCA CCTTCGCCGG CGGGGTGCCC GCACCACAGG CCGCCAGCGC ATCGCATCTC GCGCTGGATC CGTCGGCCGC CTATCTGGTT GCGGGCGGCA CCGGCGGTCT GGGCTTCGCC ACGGCACGCT GGCTGGTCGA GCGCGGCGCA CGTCATCTGG TGCTGGCCAG CCGGCGCGGC ACGCTCGCGC CCGAACTGGC CGAGGAAGCG GCGCACTGGC GCGACACGCT CCAGGTAGAT ACGGCGGTCG TGTCGTGCGA CCTCAATAAT GGCGCGGCGG TGCGCGCGCT GGTCGACGGA CTGGGCCGCA GCGGCACGCC GCTGAAGGGG CTCGTGCATT CGGCAATGAC CATTGCCGAC GGCCTGATCG CCAACCTGGA CGACGCCAAG ATGCGCGACG TACTGGCGCC CAAGGTTGCC GGTGCCTGGA ACCTGCATCA GGCCACGCGC GAACTCGCCC TGGACTTTTT CGTGGTGTAT TCGTCGGCCA CCACCTTCCT GGGCAACCCC GGGCAGTCCA ACTACGTGGC CGCCAACGCC TTCCTTGAGG CGCTGATTCA CCAGCGCCGC GCGCAAGGCC TGCCGGGCAC CTACATGGCT TGGGGCCCAC TCGAGGACGT GGGCTTCCTC GCCCGCAATG CCCAAACACT GGAGGCGTTG CAGGCCCGCA TTGGCGGCCG CGCAATCACC TCCGCACAGG CGATGACCGC GCTCGAACAG GTGCTGCAGT GCGGCCATGC CGGCGAAGCG CTACTGTGGC TCGACTGGAA GTCCATCTCG CGCGTCATGC CAGCCGCACG CTCGCTGCGC TATCTCGACA TGCGGGGCGG CATCGGACAG GAAACGCAGC GCGCCGATGG CGCCAGCATG CAAGCCGAGA TCCGCGCGCT TGACTCCGCC GAAGCCGTGC AACTGGTGAT CGAGACACTG CAGGCACAGA TCGCTCGGAT CCTCCACCTA TCTGCCGCCA AGGTCGATCC TGATCGCTCA GTGACCGATC TGGGCATGGA CTCGCTGATG GGCATGGAGC TCGGCATGGC AATTGAGGAG TGCTTCGAGG TCAAGCTGCC GGTGATGATG TTGGCCGAAG GTGCGACCGT GCGCTCGCTC GCGCAGAAGA TAGCTGAATC GGTGCGCGCC GGCGCAACCG ACGGCCAGGA AGCAGGCGCT GCAAGTGATG TCGAGCAGCA ATTGGCCTCA CTGTCGGCCA TCCATGGCTC GGAAATCAGC AGCGACGAAC TGCAACGCAT GGCACGCGAA ATGACCGCCA ACCGAGCAGT CGCAGATGTC CTCACTGAGA CGACCTCGTG A
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Protein sequence | MKDAIAIVGM SCRFPGGVHS PEDYWKLLVA ETDAVTEVPA DRFSTEFYQH PSKREPGKSY TFAAGVIDNV AGFDADFFGI SPREAQQMDP QQRLLLELAW EAFEHAGHHP QQMAGQNCAV FVGVAAQDYG DRGVDDLSVV DAYSATGNTL SIASNRISYL FDLRGPSMSI DTACSSSLVA LHQACNAIRA GEVETALAGG VNLLLHPFPF VSFAKASMLS PTGRCRAFDA SGDGYVRAEG GALVLLKSLS KALADGDTIH AVIASSGVNS DGHSQGGINV PASATQAALL ENVYARAGVD PREVDYLEAH GTGTAVGDPI ETRALIDVIG KLRSPDAPLL IGSAKTNVGH LETASGMAGL IKAILCLKHR AVPASIHFRT PNPNIDFTGG NLRVVDRYTP LAAKDKRLLV GVNSFGFGGT NAHVLLREAA PPSKAAKAGK AISVAQNRPA PLMLSARSQE ALQALAAAYR DQLGAGTSWQ ALAGATAHRR QPLRYRAVID PSNAADVAAD GIAALAALAQ GDTCPAVVTG EAVANDGKLA LVFSGNGSQW AGMGQRLLQE DSVFCATVKQ IDAFWCADGS ASLLDVMRAG ATAEWLQRTE NAQPLLFAIQ AGIVQSLLEQ GLRFDACYGH SVGEVAAAYA AGALSMEQAV RVIKVRSRAQ ALTAGKGKMA AAGVGEGAAR ELIAALGLDD VLEVAGINSP GAVTLAGPLT ALEAVQAHLA QANQFFQMLD LDYAFHSRQM DAIHDVVVEG LRGLQPRATH STFVSTVTGT PLSGAELDAS YWWRNIREPV QFEPATRQLI DGGMRLFLEI GPHSILRAYV SQSLEAARAN GSALPTLKRN HDQSSQLRHA FCTALAHGAR LDRNTVYPDA HRDVVLPTYP WQRTPYWAPI TAEGYDLVHR HRQHPLLGYR LKDCAAAWEN QIDPVKLPML ASHVVDGAVT FPGAGYAEMA LAAARSYFGT VTCAVENLEI RTPVVFQPQQ GRLFRFTLDP RTAGFVIETR PRVSDDPWTI NVAGRLLIGG PSQTAPAIEP QSMAALEEQA PIAGSTLYQA ALAIGLEFGE AFRWVQTVRI DGDVALAELA APASQQAHLD RYTMHPGALD SGLHPLLALM AAGKPSAEQA AYVPVQFGRM DYFGGVPARV VARIERRSPH SLVANFQYLD AGGNTVLKLS ACRFRRVDLI RRRHGKPGRY VFALEAKPAT EAIAAAATPS PASLLATAAT MVAGTEDAAH RDRHLTEVMP LIDVLAAAYA LRAVEALHVR AKAELPACAN PALLARLVDM LLEDGILVRR DGVLALDDET LPPIEELWRS LLSLSPSHVA ELTLLAHCGA SLPAILNGEL EAGAVLPPAR NSLLDHLFEA SPTWSHVNAM ASASLDACIE RWTQRRPMRV LEIVPPEANL FEPIGAHLQG RCEYTIAGSP EQLGAFDTGR HPLIRTATLQ LSDQPELTVE PGRSHTFDVV VVNNLLRTSG KPNRLLAAVR TWMTPGALLV LSEAQPSRFS DIVFGLSPEW WSAGRGDLLP AESIEAMLLA EGFQSPARHV EADLQIEGAP ALLLARRQLG RQADSCDIGE IVTEGIDGNA EQLGANWLVV CPGTPAELAT TLAAALEEAL AGASLASRSP RVALVESPEA ALAHAALDEA GAPCQIVFLA ADAPRLDDSA DAGTLMQAQE PTSVALARLV RGLSGKRASA QLSIVTCGGA PLAAPGTPAM ALQPSQATLW GLGRVLMNEH AELHCRLIDI DPRETQPVPA LSRELLCADA EDEVVLGLEE RYVPRMLTAE VSELREQATR AAAGASAIPA VLGFESPGSL SHLQWFPLPE FELEPDEVEV EPMAAGLNFR DVMYAMGLLS DEAVENGFAG PTIGMEFSGR VTRVGSAVAN FASGDLVLGF APACYASRLR TRATALAHKP ARLSFEEAAT IPTTFFTAYY GLNELARIRK GERVLVHGAA GGVGIAAIQL ARHLGAEVFA TASSNEKREF VRLLGASRVF DSRSLAFADE IRRATGGEGV DVVLNSLAGE AMVRSIDVLR PFGRFLELGK RDFYENSRIG LRPFRNNISY FGIDADQLMD ASPQLTASLF AQVMALLDQG VLDPLPYRAF PAARIEEAFR YMQQARQIGK IVVTFAGGVP APQAASASHL ALDPSAAYLV AGGTGGLGFA TARWLVERGA RHLVLASRRG TLAPELAEEA AHWRDTLQVD TAVVSCDLNN GAAVRALVDG LGRSGTPLKG LVHSAMTIAD GLIANLDDAK MRDVLAPKVA GAWNLHQATR ELALDFFVVY SSATTFLGNP GQSNYVAANA FLEALIHQRR AQGLPGTYMA WGPLEDVGFL ARNAQTLEAL QARIGGRAIT SAQAMTALEQ VLQCGHAGEA LLWLDWKSIS RVMPAARSLR YLDMRGGIGQ ETQRADGASM QAEIRALDSA EAVQLVIETL QAQIARILHL SAAKVDPDRS VTDLGMDSLM GMELGMAIEE CFEVKLPVMM LAEGATVRSL AQKIAESVRA GATDGQEAGA ASDVEQQLAS LSAIHGSEIS SDELQRMARE MTANRAVADV LTETTS
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