| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1122 |
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| Symbol | |
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| ID | 6286671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1197992 |
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| End bp | 1199548 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642624695 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_001898702 |
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| Protein GI | 187928215 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.390986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.386447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCG CCGCGCCCAA GCCGCTACAG CCACTGACCG GCGCCAAGCT GGCGATCGGT
ACCGTCGCGT TGTCGCTGGC CACCTTCATG AACGTGCTGG ATTCGTCCAT CGCCAACGTG
TCGATCCCGG CCATTTCGGG CGACCTGGGC GTGGCCCCGA ACCAGGGCAC GTGGGTCATC
ACCTCGTTTG CGGTGGCCAA CGCCATCTCG GTGCCGCTCA CGGGGTGGTT GACGCAGCGT
TTCGGGCAAG TGCGCCTGTT CGTCACGTCG ATCCTGCTGT TCGTGTTGTC GTCTTGGGCG
TGCGGGCTGG CGCCCAATAT GGGCATGCTG ATCGCCGCCC GGATCATCCA GGGCGCTGTG
GCGGGCCCAA TGATTCCGCT GTCGCAATCG TTGCTGCTGT CGACCTATCC GCCCGCCAAA
AGCTCAATGG CGTTGGCGCT GTGGGGTATG ACGACGCTGG TCGCGCCAAT CATGGGCCCG
ATCTTCGGCG GCTGGATCTC CGACAACATG AGCTGGCCCT GGATCTTCTA CATCAACATC
CCGGTGGGCA TCCTGGCTGC CTATGCGACG TGGGTCATCT ACAAGGACCG TGAATCGCCG
ACACGTTCGC TGCCCATCGA CAAGATCGGC CTGGCGCTGT TGATCCTGTG GGTCGGCTCG
CTTCAGTTGA TGCTCGATCG CGGCAAGGAA CTCGACTGGT TCAACTCGAC CGAAGTCGTG
GTGCTGACGG TCGTCGCCAT CGTGGGCTTC GCGTTCTTCC TCATATGGGA GCTGACCGAA
GATCACCCCG TGGTGGATCT GACGCTGTTC AAGGGCCGCA ACTTCAGCGC GGGTGTCGTC
GCCATCTCCG TGGCGTACGG CCTGTTCTTC GGCAACCTCG TGATCCTGCC GCTATGGCTG
CAGACCATCG TCGGCTACAC CGCCACCGAT GCGGGCCTGA TCATGGCACC GGTGGGCATC
TTCGCCATCA TTCTCTCGCC CGTGATCGGC AAGAACCTGC CGAAGATGGA TGCACGCTGG
GTCGCGACCA CGGCGTTTAT GACCTTCGCG CTGGTGTTCT GGATGCGCTC GCGCTTTACC
GTACAGGTAG ATACGTGGAC GCTGATGATC CCGACGCTGA TCCAGGGCGC GGCCATGGCG
ATGTTCTTCA TCCCGCTCAC GTCGATCATC CTGTCGGGTC TGTCGCCCGA GCGGATTCCG
GCCGCCTCCG GGCTATCGAA CTTTGTGCGG ATCATGTTCG GCGGTATCGG TGCATCGATC
TCGACCACGG TGTGGGACAA CCGCTCCGCC CTGCACCATG CGCAACTGGT TGAACACGTG
AATCCGTACA ACCCGGCCTA TGCGTCGTCG ATCAACCAGT ACACGCAATT GGGCATGCCC
AACCTGCAGG CCCATGGCGT GATCGAACGT GTGATCTCGC AGCAGGCCGC AATGCTGGGC
GCCAACGATA TCTTCTGGAT TTCGGCCGTG CTGTTTATCG TGCTGATCGT CTTCATCTGG
CTGACCAAGC CGGCGAAGTC GGCCGCCGGC GCAGAAGCTG CAGCCGGCGC GCACTGA
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| Protein sequence | MATAAPKPLQ PLTGAKLAIG TVALSLATFM NVLDSSIANV SIPAISGDLG VAPNQGTWVI
TSFAVANAIS VPLTGWLTQR FGQVRLFVTS ILLFVLSSWA CGLAPNMGML IAARIIQGAV
AGPMIPLSQS LLLSTYPPAK SSMALALWGM TTLVAPIMGP IFGGWISDNM SWPWIFYINI
PVGILAAYAT WVIYKDRESP TRSLPIDKIG LALLILWVGS LQLMLDRGKE LDWFNSTEVV
VLTVVAIVGF AFFLIWELTE DHPVVDLTLF KGRNFSAGVV AISVAYGLFF GNLVILPLWL
QTIVGYTATD AGLIMAPVGI FAIILSPVIG KNLPKMDARW VATTAFMTFA LVFWMRSRFT
VQVDTWTLMI PTLIQGAAMA MFFIPLTSII LSGLSPERIP AASGLSNFVR IMFGGIGASI
STTVWDNRSA LHHAQLVEHV NPYNPAYASS INQYTQLGMP NLQAHGVIER VISQQAAMLG
ANDIFWISAV LFIVLIVFIW LTKPAKSAAG AEAAAGAH
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