Gene Rpic_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1112 
Symbol 
ID6288774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1186079 
End bp1186822 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content64% 
IMG OID642624685 
Productputative transmembrane protein 
Protein accessionYP_001898692 
Protein GI187928205 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.75356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.859222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTG CAGCGCTTCT GAGCGTTTTC CTCATCGCAT TGCTCGGCGG TGTGCATTGT 
CTGGCGATGT GCAGCGGGAT CGCACTTGCA GCCGAACGTG GAACTGTGGC GGTACGGGTC
GTGTCGCGTC GCCGACTATG GTTCGAGCAG GTCGTCATGC ATGCCGGCCG GCTGACCACC
TACGCGCTGC TTGGCGCAAT CATGGGTGCG ATGGGCGCGA CCTTCTGGCG CCAGCAATGG
CTGCCGATTC AACGCGGCTT GTTTGCTTTC GCCAGTGTAT TGCTAGTCAC CTATGGGATT
TTGCTGCTCG TGCGCTCCGC CGGAGATGCG TGGCGCAGTG TGTGGCTTGA GCGCTTGCTC
GGCCGCGTCG CTGGCCGCCT GTCTCGGGGG ACTGCCACAC TGGGCGGCAC GCTGCAACGT
CAGCCGCCGT TGCTACGCCG CTATATCACG GGTATGGCCT GGGGACTGGT GCCGTGCGGC
ATGGTCTACG GCGCATTGGC TGTGGCGTTG CTGGCAGGCA ACGCTGCCTC CGGGGCTGTG
GTCATGCTCG CCTTTGGTGC AGGTACACTG CCCAACCTGT TGATGATGTC TGGCTTCGCT
GGGTGGCTGC GTGGCTTGTC GCGCCGCCGG TGGGTGCGTG GCGCGGCCGG CATCGCCATT
GCGGGGTTCG GGATATGGGG GCTGGTGCAC GCGATCTGGC TGCCAGAGAT GCTCAACGCA
CACGGATTCT GTCTGGTGCT GTAG
 
Protein sequence
MSAAALLSVF LIALLGGVHC LAMCSGIALA AERGTVAVRV VSRRRLWFEQ VVMHAGRLTT 
YALLGAIMGA MGATFWRQQW LPIQRGLFAF ASVLLVTYGI LLLVRSAGDA WRSVWLERLL
GRVAGRLSRG TATLGGTLQR QPPLLRRYIT GMAWGLVPCG MVYGALAVAL LAGNAASGAV
VMLAFGAGTL PNLLMMSGFA GWLRGLSRRR WVRGAAGIAI AGFGIWGLVH AIWLPEMLNA
HGFCLVL