| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1042 |
|---|
| Symbol | |
|---|
| ID | 6289579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 1108315 |
|---|
| End bp | 1109364 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642624614 |
|---|
| Product | NMT1/THI5 like domain protein |
|---|
| Protein accession | YP_001898622 |
|---|
| Protein GI | 187928135 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.778479 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGACAC AAGTCATCGG GCGCTGGGCA AAGTGGATGG GCGCTGCACT GTGTGCGACG
AGCCTGCTGG CTGCCAGTCC AGCCGTTCTG GCGCAGGGCA AACCTGAAAA GAGCAAGGTC
ACCATCGCGG TGGGCGGCAA GGCGTTGTTC TACTACCTGC CGCTGACGAT TGCAGAGCGT
CTGGGTTACT TCAAGGACGA AGGCCTGGAC GTTGAAATCG TCGACTTTGC TGGCGGCGCA
AAAGCCCTGC AGGCCGTGGT GGGCGGTAGC GCCGACGTGG TGAGCGGCGC GTACGAGCAC
ACGCTGGTGC TGCAGGCCAA GGGGCAGATG TACCAGGAGT TCGTGCTGCA AGGGCGGGCC
CCGCAGATCG TGCTGGCGGT CAACAACAAG ACGGTGCCCA ACTACAAGTC GATTGCCGAT
TTGAAAGGCA AGAAGATCGG CGTGACGGCT CCCGGTTCGT CGACCAACAT CATGGTCAAC
TATGTGCTGG CGCGCGCCGG CATCAAGCCG AACGAAGTGT CGATCATCGG CGTGGGTCCG
AGCAGCGGGG CGATTGCCGC CGTGCGTGCT GGGCAGATCG ATGCCCTGGC CAACCTGGAC
CCGGTGATGT CGATGCTCAC GCAAAAGAAC GAAGTGCGCG TCGTGTCCGA TACCCGCACC
CTGGCCGATA CCAAGGCGGT GTTCGGTGGC AACATGCCGG CCGGCTGCCT GTACGCGTCT
ACCGCGTTCA TCCAGAAGAA TCCCAACACG ACGCAGGCGA TGACCAACGC CATGGTGCGT
GCGCTCAAGT GGCTGCAAAA GGCGGGCCCG TCGGACATCG TCAAGACGGT GCCCGAAGCC
TATCTTTTGG GCGACCGTGC GCTGTATCTG GCGGCGTGGG AGAAGGTGCG TGAGGCCATC
TCGCCGGATG GCACGATGCC GGCCGACGGC CCGGCTACGG CGCTGCGCAC GCTGTCGGAG
TTCGATGCGG AAGTGAAGGG CAAGCAGATC AAGCTCGACC AGACCTTCAC CAATACCTTC
GTGCAGAAGG CCAACGCCAA GTACAAGTAA
|
|---|
| Protein sequence | MGTQVIGRWA KWMGAALCAT SLLAASPAVL AQGKPEKSKV TIAVGGKALF YYLPLTIAER
LGYFKDEGLD VEIVDFAGGA KALQAVVGGS ADVVSGAYEH TLVLQAKGQM YQEFVLQGRA
PQIVLAVNNK TVPNYKSIAD LKGKKIGVTA PGSSTNIMVN YVLARAGIKP NEVSIIGVGP
SSGAIAAVRA GQIDALANLD PVMSMLTQKN EVRVVSDTRT LADTKAVFGG NMPAGCLYAS
TAFIQKNPNT TQAMTNAMVR ALKWLQKAGP SDIVKTVPEA YLLGDRALYL AAWEKVREAI
SPDGTMPADG PATALRTLSE FDAEVKGKQI KLDQTFTNTF VQKANAKYK
|
|---|
| |