| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1017 |
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| Symbol | |
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| ID | 6287291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1076380 |
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| End bp | 1078035 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624586 |
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| Product | ABC transporter related |
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| Protein accession | YP_001898597 |
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| Protein GI | 187928110 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0546481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG TCGATCTGCG TTCCTCAGCG CCGAAGTACG ACGGCCCGCT GCTGCGCCTG
GATGACCTGT GCGTGCATTT CGAATCCGAG CACGGCGAGG TGACGGAAGC CGTCAAGCAT
GTCTGCTTCG ATTTGCACGC CGGCGAGCGG TTCGCGTTGG TGGGCGAATC CGGCTCGGGC
AAGTCCGTCA CCGCGCTATC GATCATGCGC TTGCTGGCCG ACGCGCAATA CAGCGGCCGC
ATACTGCTCG AAGGGCGCGA CCTGCTGGCC GCCAGCGAGC GCGAAATGCG CGGCCTGCGT
GGCGCCGACG TCGCCATGGT GTTCCAGGAA CCGATGACAG CGCTCAACCC GCTGTACACG
ATCGGCAACC AGATCGTCGA AACGCTGGAA TTGCACGAGG GACTGGACAA GCGCGCTGCC
AAGGCACGTG CGATTGCGCT GCTGGAACGC ACCGGCATTG CCGAGGCGCC GCGCCGGTTT
GACGCCTTCC CGCACCAACT GTCGGGTGGT CAGCGCCAGC GCGCAATGAT CGCCATGGCG
CTGGCGTGCT CGCCCAAGCT CCTGTTGGCC GATGAGCCGA CCACCGCGCT CGACGTGACG
GTGCGCATGC AGATCCTGCA GTTGCTGCGC GAACTGCAGG CCGAGTTCGG CATGGCGATC
ATGCTGATCA CGCACGACCT GAACATGGTG CGTGCCTTCG CCGAGCGCGT CGGCGTGATG
GAGCGCGGCA TCCTGGTCGA AACCGGCAGC ACGGCCGACG TATTTGCCGC GCCCCAACAT
CCGTACACCG TGCGCCTGCT TGAGAGTCGT CCGCAGCGCG ACGTGCTGCC GCTAGTGCCG
CTTGCGCCCG TGCTGCTCGA AGCCGACAAG CTGACGGTCA TCTACGAGCG CCATCGCCCC
GGGTTTGCCG GCTGGTTCAG GGCAGATCCG TTCACCGCGG TCGATGCCGT GTCGCTGCAA
CTGCGCGAAG GCGAGACGCT CGGCATCGTG GGTGAATCCG GCTCCGGCAA GACCACGCTC
GCGCAGACGC TGCTGGGTCT GCAAGCAGCA AAGAGCGGCG ACTTGCGTTT CCTTGGCAAC
TCGCTGCTGC ACATTTCGCG CGACGAGCGC CGCGCGGTGC GTGCGCGCAT GCAGGTCGTG
TTTCAAGACC CGTATGGCTC GCTGTCGCCA CGCATGACGA TTGAGGAGAT CGTCGGCGAA
GGACTGGCAC TGCACCAACC GCATGTCAAC GTTACAGAGC GGCGCCACCG CGTGATCGAG
GCGCTGCGCG AGGTCGGCCT CGACCGCACG GCGCTGGGCC GCTATCCGCA TGAGTTTTCA
GGCGGGCAGC GCCAGCGCGT CGCCATTGCC CGAGTGCTTA TCCTCAAGCC GCAGCTGCTG
GTGCTGGATG AACCGACTTC GGCACTTGAC GTGTCGATCC AGCAGCAGGT GCTCTCGCTG
CTGTCTGCCC TTCAGAAAAA GTACAACCTG TCGTATCTGT TCATCAGCCA CGACCTTGCT
GTCATCCGCG CGATGTCACA TCGCGTGGTG GTGATGAAGG ATGGAAAAGT GGTGGAAGAG
GGCGACACTG AAGCGGTATT GGCGTCGCCT TCGCACCCCT ATACCTGCAA GCTAATGGCG
GCGGCTTCGC TCATCCCCAC CCGGGATAAC CCGTAA
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| Protein sequence | MTRVDLRSSA PKYDGPLLRL DDLCVHFESE HGEVTEAVKH VCFDLHAGER FALVGESGSG
KSVTALSIMR LLADAQYSGR ILLEGRDLLA ASEREMRGLR GADVAMVFQE PMTALNPLYT
IGNQIVETLE LHEGLDKRAA KARAIALLER TGIAEAPRRF DAFPHQLSGG QRQRAMIAMA
LACSPKLLLA DEPTTALDVT VRMQILQLLR ELQAEFGMAI MLITHDLNMV RAFAERVGVM
ERGILVETGS TADVFAAPQH PYTVRLLESR PQRDVLPLVP LAPVLLEADK LTVIYERHRP
GFAGWFRADP FTAVDAVSLQ LREGETLGIV GESGSGKTTL AQTLLGLQAA KSGDLRFLGN
SLLHISRDER RAVRARMQVV FQDPYGSLSP RMTIEEIVGE GLALHQPHVN VTERRHRVIE
ALREVGLDRT ALGRYPHEFS GGQRQRVAIA RVLILKPQLL VLDEPTSALD VSIQQQVLSL
LSALQKKYNL SYLFISHDLA VIRAMSHRVV VMKDGKVVEE GDTEAVLASP SHPYTCKLMA
AASLIPTRDN P
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