Gene Rpic_0995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0995 
Symbol 
ID6287847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1052641 
End bp1054506 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content65% 
IMG OID642624563 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001898575 
Protein GI187928088 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.203772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGC TCAGCTTTCG CCAAAAGCTT TGGCTGCCGC TGATCATCAG CCTTGTCGCG 
CTGACCTTGA TCTCGGTATT CAACGCGTAT CAGGCGCGCG AGATCCGCGT CGAGGAGCGC
AAGAACAACC TCGTCAGCGT GACGACCATG GCCGTGAACC TGGTCAAGCA ATATGACGAC
CTGACCAAGA ACGGCACGTT GAGCAAAGAC GCCGCGCAGA AAGAGGCGCT CGACCGCTTC
AAGGCGCTGC GCTACGACAA GGACGGCTAC TTCACCATCA CCAGCTCCAA CAACGTGGTG
GTGATGCACC CGATCAAGCC CGAGTTCATC GGCAAGGACC AATCCGGCTT CAAGGACGCA
CAGGGCAATG CCGTCTACGT GGGCTTGTCC AACGCGGCCA AAGATCCGAA GGGCGGATTC
ACCAGCTATG TGTGGCCGAA AGTCGGCGGC TCGGAGCCGG TGCCCAAGAC GGCTTTCGCG
ATGCGCTATG AGCCGTGGGA CTGGGTCTTC TCGACCGGCG TCTACATGGA CGACATCAAT
GCCGCGTTCA TGACTTCGCT GTACCAAACC GGCGGGCTGC TGGTATTGGT CGGCGGTTTG
CTGTTGCTGC TGGGCGGCGT CGCGAACCGC AGCCTGCAGC GCACGCTGGG CGGCGACCCC
GCCTACGCGG CTGATGTGGC CAACCGCATT GCCGGCGGTG ACCTGACGCT GGAGATTGCC
ACCCGCGCCG ACGACAACAA CAGCCTGCTC TACGCCATGA GCCGCATGCG CGGCGCGCTG
GTGGACACCA TCGGCCGCAT CAAGGGCGCG TCGGAGACCA TCGGCACCGC CACGCGCGAA
ATCGCCAGCG GCAACCTGGA TCTGTCGTCG CGCACCGAGC AGCAGGCCAG CTCGCTGGAA
GAAACGGCTT CGGCCATGGA GCAGCTGATG TCGACCGTGC AGCAGAACGC CGACAACGCC
CAGCAGGCCA ACCAGTTGGC CGCGTCCGCC TCGGATGTGG CCGTGCGCGG CGGCGACGTG
GTGACGCGCG TGGTGGAAAC CATGGGCTCA ATCAACGCGT CGTCACGCAA GATCGTCGAC
ATCATCGGCG TGATTGATGG CATTGCGTTC CAGACGAACA TCCTTGCACT CAATGCGGCA
GTCGAAGCCG CGCGTGCGGG GGAACAGGGC CGTGGTTTTG CTGTGGTGGC CGGTGAGGTG
CGCAGCCTTG CGCAACGCAG CGCGGCTGCC GCCAAAGAGA TCAAGGCGCT GATCGATGAT
TCCGTCGTCA ACGTGGATGC AGGCAGCGCG CTGGTGGAAG AAGCCGGCAC GACCATGCGG
GAGATCGTCG CGAGCGTGAA GCGCGTGACC GACATCGTTG GCGAGATTTC GTCGGCCAGC
CAGGAACAGC GCTCCGGCAT TGAAGAAGTG AGCCACGCCG TCACGCAGCT TGACGACGCC
ACGCAGCAGA ACGCTGCGCT GGTGGAGCAG GCCGCTGCTG CTGCGCAATC GCTGGAAGAG
CAGGCCGTGA GCCTGACGCA GGTGGTGGCG CAGTTCCGCC TCGATGCGCA TGCGCTGCGT
GCGCCGGCCA TGGTGGCGCG GGTTGAGCCG GCTGTTGCGC CGGTCAAGCC CGTGGCACTC
GCAACGCCGA TGGCACCGGC ATCACCCAAG GACGAAGCGC CGCGGCGCGG GGCCGCCAGG
CCGAGCACCG AAGCTGCCAA GCCCAAGCTG ACGTCGCGCA AGCCGCCTGT GTTGCGAAAG
GCTGCTGCCA AGCCGGTCGA GCGAACCGAA AAGAGCCTGG CTGCACCGGC AGCGATACCC
GCGAGCCTGG CCAAGGCGAA GCCTCTGGTC GCCGCTGGAG ACAACGCTGA CTGGGAAACG
TTCTGA
 
Protein sequence
MSKLSFRQKL WLPLIISLVA LTLISVFNAY QAREIRVEER KNNLVSVTTM AVNLVKQYDD 
LTKNGTLSKD AAQKEALDRF KALRYDKDGY FTITSSNNVV VMHPIKPEFI GKDQSGFKDA
QGNAVYVGLS NAAKDPKGGF TSYVWPKVGG SEPVPKTAFA MRYEPWDWVF STGVYMDDIN
AAFMTSLYQT GGLLVLVGGL LLLLGGVANR SLQRTLGGDP AYAADVANRI AGGDLTLEIA
TRADDNNSLL YAMSRMRGAL VDTIGRIKGA SETIGTATRE IASGNLDLSS RTEQQASSLE
ETASAMEQLM STVQQNADNA QQANQLAASA SDVAVRGGDV VTRVVETMGS INASSRKIVD
IIGVIDGIAF QTNILALNAA VEAARAGEQG RGFAVVAGEV RSLAQRSAAA AKEIKALIDD
SVVNVDAGSA LVEEAGTTMR EIVASVKRVT DIVGEISSAS QEQRSGIEEV SHAVTQLDDA
TQQNAALVEQ AAAAAQSLEE QAVSLTQVVA QFRLDAHALR APAMVARVEP AVAPVKPVAL
ATPMAPASPK DEAPRRGAAR PSTEAAKPKL TSRKPPVLRK AAAKPVERTE KSLAAPAAIP
ASLAKAKPLV AAGDNADWET F