| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0991 |
|---|
| Symbol | |
|---|
| ID | 6287200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 1047105 |
|---|
| End bp | 1047629 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642624559 |
|---|
| Product | putative FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) protein |
|---|
| Protein accession | YP_001898571 |
|---|
| Protein GI | 187928084 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.179894 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAATCG CGAAGAATAC GGTAGTGTCG GTGGCTTACA AACTGTCCGA CGCGCAGGGC
AACGTCATCG AGGAATCCGA TGAGCCGATG GTGTATTTGC ACGGCGGCTA TGATGGCACG
TTCCCCAAGA TCGAGGAAGC GCTGGACGGC CAGGAACAAG GCTTCGAGAC CAAGCTGCAG
CTCGAACCGG ACGACGCTTT CGGTGACTAC GATCAGGAGC TGATCAAGAT CGAGCCGCGT
GATCGCTTTC CGGAACCGCT CGAAGTTGGC ATGCAGTTCG AGGGCGTGCC CGAAGATGGC
GACGAGGAAG ATGCCATCGT CTATACAGTC ACCGACGTGG CGGAAGACAA GGTTGTGCTG
GACGGCAATC ACCCGCTCGC CGGCATGGCG CTGCGCTTCG AACTGAAGGT GACCGAAGTG
CGGGAAGCCA CGGCTGAAGA GATCGAGCAC GGCCACGTGC ACGGTGAAAA TGGCCTTGAA
GTGGTGGACG AGGACGAGGA CGATAAGCCG CACACGCTGC ACTGA
|
|---|
| Protein sequence | MKIAKNTVVS VAYKLSDAQG NVIEESDEPM VYLHGGYDGT FPKIEEALDG QEQGFETKLQ
LEPDDAFGDY DQELIKIEPR DRFPEPLEVG MQFEGVPEDG DEEDAIVYTV TDVAEDKVVL
DGNHPLAGMA LRFELKVTEV REATAEEIEH GHVHGENGLE VVDEDEDDKP HTLH
|
|---|
| |