| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0962 |
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| Symbol | |
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| ID | 6289614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1018411 |
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| End bp | 1019223 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624530 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001898542 |
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| Protein GI | 187928055 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00454471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0309103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGATCG ATACCCATTG CCACCTCGAT GCCAGCGACT TTGATGCCGA CCGTGATGCG
GTCGTCGCGC AGGCGCATGC AGCGGGTGTC AACCACATCG TCGTGCCGGC GGTGGCACGC
TGGAATTTCG ACGCGGTGCG GGCGCTGGCA CATCGGCATG CCGGTTGCAG TTATGCGCTG
GGCATCCATC CGATCTACGC CGCGCAGGCC AGTGAAGAGG ACCTCCTCGA GCTGCGCCGC
CAAGTCGCCG CGTCAATGGA CGACCCGCGC TTTGTGGCGG TCGGCGAGAT CGGCCTCGAT
TTCTTCATTC CCAACTACGA CATTGAACGG CAGAACGCCG TGTTCCGTGC GCAACTGCGC
ATCGCTCGCG AATTCGACCT GCCTGTGCTG ATGCACGTGC GCAAGTCGCA AGATCAGGTA
CAGAGCGCCG CGGCCAAGGC GGGTGTACGC GGCATTGCGC ATGCGTTCAA CGGCAGCCCG
GAACAGGCGC ATCGCTTTGT CGATTCCGGT TTCAAGCTGG GGTTTGGCGG CGTCTTTACC
TTTTCGCGCG CCAATCGCGT GCGTCGGCTG GCGCAGGAAT TGCCGATCGA GTCGATCGTG
CTGGAAACCG ACGCGCCTGA CCTCGCGCCA GCCTGGCTGG CCGATGATCA ATTCGGGGAG
CAGGGCGGTG TGCGCAATGT ACCCACGGAA GTCGCGCGCA TTGCCGATGC GATGGCGCAA
CTGCGCGGCA TCTCCATTGA GGCGCTGGCC TACCAGGCGC GCCGCAACAG CATCGACGCC
ATTCCCCGCC TGGAAGCGCT CCTGCAAGCC TGA
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| Protein sequence | MWIDTHCHLD ASDFDADRDA VVAQAHAAGV NHIVVPAVAR WNFDAVRALA HRHAGCSYAL
GIHPIYAAQA SEEDLLELRR QVAASMDDPR FVAVGEIGLD FFIPNYDIER QNAVFRAQLR
IAREFDLPVL MHVRKSQDQV QSAAAKAGVR GIAHAFNGSP EQAHRFVDSG FKLGFGGVFT
FSRANRVRRL AQELPIESIV LETDAPDLAP AWLADDQFGE QGGVRNVPTE VARIADAMAQ
LRGISIEALA YQARRNSIDA IPRLEALLQA
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