| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0960 |
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| Symbol | |
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| ID | 6289612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1016355 |
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| End bp | 1017605 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642624528 |
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| Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
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| Protein accession | YP_001898540 |
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| Protein GI | 187928053 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.100135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0249332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACTTC CATACGAATG GCAGATCGGC TGGCGGTATA CGCGCGCAAG CAAGCGCGCC
AGCCGCAATA GCTTCATCTC TTTCATTTCG CTCATCTCCA TGCTCGGCAT TGCGCTGGGG
GTGGCGGCGC TGATCATCGT GCTTTCGGTC ATGAACGGCT TCCAGAAGGA AGTGCGAGAC
CGCATGCTGT CGGTGCTGGC GCATATCGAA GTGATGGCGC CGAACAGCCT GCCGGACTGG
CAGCGTACCG CCAATGAGGC GATGCAGAAC AAGGAAGTCA TCGGCGCGGC GCCCTACGTG
GGCGCACAGG CCATGATCAC GCGCGACGAG GCGGTGCGCG GCGTGCTGCT GCGCGGCGTG
TCGCCGGCGG ACGAGCCGAA GGTGTCGGAC ATTGCCAAGG ATTTCAAATC GGGCTCGATC
GACGATCTGA AACCCGGCGA ATTCGGCATC GCCCTGGGCA GCCAGCTGGC CAACGGCCTG
GGCGTGCATC AGGGAGACAA GGTCACGCTG GTGGCGCCGC AGGGCACCAT CACGCCGGCG
GGCGTGTTGC CGCGCCTGAA GCAGTTCACG GTGACGGGCA TCTTCGAGTC GGGCCACTAC
GAGTTCGACA GCTCCCTCGC ACTCGTCAAC ATGGAAGACG CCGAACGACT GTTCCGCCTC
GATGGCCCGA CCGGCGTGCG TCTGAAGCTG GTCGACATGG ACCGCGCCCC GCAGGTGGCC
GAAGCGCTGT CGCGCACGTT GTCCGGCGAG CTGTACATCC GCGACTGGTC GCGCCAGAAC
CGCAACTGGT TTGCCGCCGT GAAGACCGAG AAGAAGATGA TGTTCATCAT CCTCACGCTG
ATCATCGCCG TGGCCGCGTT CAACCTGGTG TCAACGCTGG TGATGACGGT GACGGACAAG
CAGGCCGACA TCGCCATCCT GCGCACCATG GGCGCACAAC CCGCGTCGAT CATGAAGATC
TTCATCGTGC AGGGCGTTGC GATCGGGTTC ATCGGCACAT TGCTGGGGGT CGGCTTCGGC
ACGCTCATCG CTTACAACAT CGACGTGATC GTCCCTTTCA TCGAGCGTCT TTTCCACGTG
CAATTCCTGC CGCGTGACAT CTATTTCATC AGCGAACTGC CCTCGGACCC CCGCGTGAAC
GACATTGCAA CCATTGGCGT CATTTCCTTC ATCCTCGCGT CGGTGGCGAC GCTGTATCCA
AGCTGGCACG CTTCGCGCGT GAATCCGGCG GAGGCACTGC GCTATGAGTG A
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| Protein sequence | MKLPYEWQIG WRYTRASKRA SRNSFISFIS LISMLGIALG VAALIIVLSV MNGFQKEVRD
RMLSVLAHIE VMAPNSLPDW QRTANEAMQN KEVIGAAPYV GAQAMITRDE AVRGVLLRGV
SPADEPKVSD IAKDFKSGSI DDLKPGEFGI ALGSQLANGL GVHQGDKVTL VAPQGTITPA
GVLPRLKQFT VTGIFESGHY EFDSSLALVN MEDAERLFRL DGPTGVRLKL VDMDRAPQVA
EALSRTLSGE LYIRDWSRQN RNWFAAVKTE KKMMFIILTL IIAVAAFNLV STLVMTVTDK
QADIAILRTM GAQPASIMKI FIVQGVAIGF IGTLLGVGFG TLIAYNIDVI VPFIERLFHV
QFLPRDIYFI SELPSDPRVN DIATIGVISF ILASVATLYP SWHASRVNPA EALRYE
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