| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0948 |
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| Symbol | |
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| ID | 6289450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1003946 |
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| End bp | 1006357 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624515 |
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| Product | glycoside hydrolase family 31 |
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| Protein accession | YP_001898530 |
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| Protein GI | 187928043 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0874171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGT TGAATCCCCC CCGATTCGAA GTCCAGGCGC AGGAAGGCAA CCGGCTGCGG
CTGGCCAGCA GCGCCGGCGC TGCGATTGAA CTCTTCGTGC TGGAAGAAGA CATCATCCGC
GTGCTCGTGC TGCCGCAGGG CGACCTGCGC GGCCCGGCCA CGTGGTCGAT CGCCCCCGGC
GGTGACGACA CGCCGCTCGA AGGGCGTGAC CGCCGCGACC TGAGCGGCTT CGCGCTGCCC
GCATTTGCGC TGCACAGCGA CGCCGACACG CTGCGCGTGG AAACCAGCAA GATTCGCCTG
AGCGTCGCCC TGGCAGGCGG CTTCTGCACA TGGCAGATCC GCGGTGCCGG CGGATGGCAG
ACCGTGCTGA ACGATCGCCC AACGCAGGCC TACAACTTCG GCTATTGGGA CGAGCAGGTC
TACCACTACG TGCGCCGCGA ACCCGGCGAG ATGTACTTCG GCCTGGGTGA GCGCGCCGGC
GACATGAATC GTGCGCACCA GCGTTACGAG ATGCGCAACA TCGACGCGAT GGGCTATAGC
GCCCGCACGA CTGATCCGCT GTACAAGCAC ATCCCGTTCT ACGTGACGTG GCAGCCGGAA
AACCGCACCG GCTTCGGGCT GTTCTACGAC ACGCTGTCCG ATTGCAGCTT CGACATGGGC
CGCGAGCTGG ACAACTACCA CGGCCTCTAT CGCTACTTTG TCGCGCCGCA TGGTGATCTC
GACTACTACT TCATTGCCTC GCCCGATACG CCGCTCGGCG CCACGCGCCG CTTCACGTGG
ATGACCGGCC GCCCCGCGTG GATGCCGAAG TGGGGCCTCG GTTACTCCGG CTCGACCATG
ACGTACACCG ACGCGCCCAA CGCGCAGGAA CAGATGGCCG AGTTCATCAA GGGATGCCGT
GAGCACGACA TCCTCTGCGA TTCGTTCCAT CTGTCGTCGG GCTATACGTC GATCGGCCCG
AAGCGCTACG TCTTCAACTG GAACACCGAC AAGTTCCCGG ATGCGCGGGG CTTCGTCCAG
AGCTATCTGG ATGCGGGCAT TCGCCTGTGC CCGAACATCA AGCCGTGCCT GCTGCGCGAT
CACCCGAAGT TTGAAGAAGC GAAGCAAGCC GGGCTGCTGA TTTGCGATGC AGCCGGTGAG
CCGGCCTGGG TGCAATTCTG GGATGAGGTG GGCGCGTATC TCGACTTCAC CAATCCGAAA
ACGCTCGACT GGTGGAAGGC CAACGTCAAG AGCGCGCTGC TGGAATTCGG CATGGCGTCC
ACCTGGAACG ACAACAACGA GTTCGAAGTC TGGACGCCCG ACGCTTTCGC TTACGGGTTC
GGCAAGAAGG CGCCCATCCG CGAGGCCAAG GTGCTGCACA CGATGCTGAT GATGCGCGCC
TCGCGCGAAG CGCAACTTGA GTTTGCGCCG CAGCGTCGGC CGTTCCTGGT GTCGCGCTCG
GGCGGTGTCG GCATGCAGCG CTACGTGCAG ACGTGGTCCG GTGACAACTA CACGTCGTGG
GAAACGCTGC GCTACAACCT GAAGATGGGC CTGGGCCTCG CGCTGTCCGG CGTCTCGAAC
ATCGGCCACG ATATCGGCGG GTTTGCGGGC CCGGCGCCTT CGCCGGAACT GCTGGTGCGC
TGGGTGGCCT TTGGCGTCTT CCTGCCGCGC TTCTCCATCC ACTCGTGGAA CGATGACAAG
ACCGTCAACG AGCCGTGGAT GTATCCGCAG ATCACCTCGC AAATTGCCTC GCTGATCAAG
CTGCGCTATC GGCTGATTCC GTATCTGTAC GAACTGCTGT GGCAATCCAC GCAGGCCTAC
GAGCCGGTAC TGCGTCCGAC GTTTGCCGAG TTCCCGAACG ACCGCCGCTG CTACGCCGAG
TGCGATGACA TGATGATCGG CTCGTCGCTG CTGGTGGCGC CGGCGGTGGA CGAAGGGCAG
ACCGAGCGCA CCGTCTATCT GCCGGCCGGC GCGCGCTGGG TGTCGTACTG GAGCGGCGAG
GCCTTCGAAG GCGGACAGGC CACCACGCTG CCTTCGCCCT GGGACCAGCC GGTGATGCTG
GTTCGCGAAG GCGGCGTGAT CGCGCTGAAC GTGGCGGAGC AGCATTTCGA CCAGCGCGCC
GATCAACGCG GCTTCCTTGT CGTGCCCATG CAAGGCGTTG GCGAATCCGT TGGCGGCTGC
ATTGAAGACG ACGGCGAAAC CGAAGCGTGG CGCGACGGCG AGCAGGGCCG CTGGAGCGTG
CGTGCGGTGT CGGATGCGCA TGCCATCACG CTGCACGTAT CGTGCGAAGG CAAGATGCCG
ACGCTGGCTG ACACCGTTGA GATTCACCTG CCCGCCGGTG ATGTGCGGCA AGTGCAGACG
CCGCATGCCC GCGTGCTGGA AACCGTTGTT GCGGGTGGCT GGCGCCGCCT GACGTTGCAG
TTGCTGGCCT AG
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| Protein sequence | MSMLNPPRFE VQAQEGNRLR LASSAGAAIE LFVLEEDIIR VLVLPQGDLR GPATWSIAPG
GDDTPLEGRD RRDLSGFALP AFALHSDADT LRVETSKIRL SVALAGGFCT WQIRGAGGWQ
TVLNDRPTQA YNFGYWDEQV YHYVRREPGE MYFGLGERAG DMNRAHQRYE MRNIDAMGYS
ARTTDPLYKH IPFYVTWQPE NRTGFGLFYD TLSDCSFDMG RELDNYHGLY RYFVAPHGDL
DYYFIASPDT PLGATRRFTW MTGRPAWMPK WGLGYSGSTM TYTDAPNAQE QMAEFIKGCR
EHDILCDSFH LSSGYTSIGP KRYVFNWNTD KFPDARGFVQ SYLDAGIRLC PNIKPCLLRD
HPKFEEAKQA GLLICDAAGE PAWVQFWDEV GAYLDFTNPK TLDWWKANVK SALLEFGMAS
TWNDNNEFEV WTPDAFAYGF GKKAPIREAK VLHTMLMMRA SREAQLEFAP QRRPFLVSRS
GGVGMQRYVQ TWSGDNYTSW ETLRYNLKMG LGLALSGVSN IGHDIGGFAG PAPSPELLVR
WVAFGVFLPR FSIHSWNDDK TVNEPWMYPQ ITSQIASLIK LRYRLIPYLY ELLWQSTQAY
EPVLRPTFAE FPNDRRCYAE CDDMMIGSSL LVAPAVDEGQ TERTVYLPAG ARWVSYWSGE
AFEGGQATTL PSPWDQPVML VREGGVIALN VAEQHFDQRA DQRGFLVVPM QGVGESVGGC
IEDDGETEAW RDGEQGRWSV RAVSDAHAIT LHVSCEGKMP TLADTVEIHL PAGDVRQVQT
PHARVLETVV AGGWRRLTLQ LLA
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