Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0914 |
Symbol | |
ID | 6288547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 968173 |
End bp | 969234 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642624478 |
Product | putative glycerol-3-phosphate acyltransferase PlsX |
Protein accession | YP_001898496 |
Protein GI | 187928009 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0833553 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATCA AGCTTGCCAT CGACTGCATG GGTGGCGATC ACGGCGTTGG CGTGACAATC CCTGCAGCGA TCCATTTTCT CGCCGTACAC GAAGACGTCG AAATGCTGCT CGTCGGGCAG CCCGATGCCA TCGCGGCGCA GCTCAAGCGA CTTCACGCCA CCGCGAACCC GCGCGTCCAC GTCGTCCCCG CCTCCGAGGT GGTGTCGATG GACGATCCGG TCGAGGTCGC GCTGCGTAAG AAGAAAGATT CTTCAATGCG CGTGGCCATC AATCAACTCA AGGAAGGCGC CGCTCAGGCG TGCGTTTCCG CCGGCAACAC CGGCGCGTTG ATGGCCGTGT CGCGTTACGT TCTCAAGACG CTGGACGGCA TTGACCGCCC GGCAATTGCC ACCGCCATCC CGAACGAGAA AGGTGCCGGC ACGACCGTGC TGGATCTTGG TGCCAACGCC GACTGCGAGC CCGAGCACCT GCTGCAGTTT GCGCAGATGG CCTCGGCGAT GGTGTCGGTG GTCGAGCAGA AGCCGCGTCC AACGGTCGGT CTGCTCAACA TTGGCGAAGA AGTCATCAAG GGCAACGAGG TCGTTAAGCA GGCCGGTGAG CTGCTGCGCG CCTCCGATCT CAACTTCTTC GGCAACGTTG AAGGCAACGA CATCTTCAAG GGCACGACCG ACATCGTTGT CTGCGACGGC TTTGTCGGCA ACGTGGCGCT CAAGAGCACC GAAGGACTGG CCAAGATGAT CGGTGAGATG CTGCGCCAGG AATTCAGCCG CTCGTGGTTC ACCAAGTTGC TCGCTGTCGT GGCGCTGCCG GTGCTGACGC GTTTCAAACG GCGCGTTGAT CATCGGCGCT ACAATGGCGC CGCGCTGCTC GGTCTGCGTG GGCTGGTCAT CAAGAGTCAC GGCTCGGCCG ACGCCTACGC GTTCGAATGG GCCATCAAGC GTGCCTACGA CGCCGCGGCC AACGGCGTGA TCGCCCGCAT TGCGCAGGCG TTCGAATCGC ACCATGACGC AGCGGGCGCT GCGCCGGTCT CCACTTCCGC TCCGGCCGCC GACGCTGCTT GA
|
Protein sequence | MTIKLAIDCM GGDHGVGVTI PAAIHFLAVH EDVEMLLVGQ PDAIAAQLKR LHATANPRVH VVPASEVVSM DDPVEVALRK KKDSSMRVAI NQLKEGAAQA CVSAGNTGAL MAVSRYVLKT LDGIDRPAIA TAIPNEKGAG TTVLDLGANA DCEPEHLLQF AQMASAMVSV VEQKPRPTVG LLNIGEEVIK GNEVVKQAGE LLRASDLNFF GNVEGNDIFK GTTDIVVCDG FVGNVALKST EGLAKMIGEM LRQEFSRSWF TKLLAVVALP VLTRFKRRVD HRRYNGAALL GLRGLVIKSH GSADAYAFEW AIKRAYDAAA NGVIARIAQA FESHHDAAGA APVSTSAPAA DAA
|
| |