Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0909 |
Symbol | |
ID | 6288720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 964515 |
End bp | 965609 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642624473 |
Product | peptidase S49 |
Protein accession | YP_001898491 |
Protein GI | 187928004 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0531296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACT CGATTCCGCC GAAAGGGCCC GACGACGCCC CCAACGAGGG TGCAGGCAAA CCAGAAGCGC TGGAAGTCAC ACAGCATGCG GATCATCCGC TTGAAGCTGA ATTGCGTAAC CCGCCCGCAT CGGCATCGGC AGCTTCTGCG CCGGCCGGCG GCTGGGAGCG TGAGGTACTC GAAAAAGTAC TGATGGCAAC GGTCCGTGAG CAGCGCGCCG CGCGCCGCTG GCGCATCTTT TTCCGCTTCG TGGCTCTGGG CCTGATCGGA GTGCTTATTT ATGCGTTCGC CAGCTTGGAG GGCGAAACCG TCAGCACGGG CCGCCACACA GCGATTGTCA CGCTGGAGGG CGAAATTGCG GCGAACACAA ACGCCAGCGC CGAAAACATC AACGCATCCT TGCAGGCCGC GTTTGCAGAT GACAACACCG TCGGTGTGAT CCTGAAGATC AATTCGCCGG GCGGCTCGCC GGTGCAGGCG GGCATGATCA ACGATGAAAT CCGCCGTCTT CGCGCCAAAT ACAAGAAGAT TCCGCTGTAC GTCGTCGTGG AAGAAATGTG CGCGTCAGGC GGTTACTACG TGGCTGCCGC TGCTGACAGG ATTTACGTCG ACAAGGCCAG CATCGTCGGT TCCATCGGCG TGCTGATGGA CGGCTTCGGC TTTACTGGTC TGATGGACAA AGTGGGCGTG GAGCGCCGCC TGCTCACCGC CGGTTCGAAC AAGGGAATGC TCGATCCGTT CTCACCCGTG TCGCCCCAGC AGAAACAGTA TGCGCAGGAG ATGCTGGACC AGGTGCATCA GCAGTTCATC GACGTGGTCA AGCAGGGCCG CGGCAACCGT CTGAAGGACG ATCCCACGCT GTTCACTGGT TTGTTCTGGA CGGGCGCCAA GGCGGTGGAT CTGGGCCTGG CCGACGCGAT CGGCAGTTCG GACCTTGTCG CGCGCAGCGT CATCAAGGCG CCGGACGTGG TGGACTACAC CGTCAAGGAA AACTTCGCCT CGCGCGTGGC ACGCAAGCTC GGCACGGCGA TGGGCGCGGG CGCAGTCAAG GCGCTGGCCA CTACGGGCCA GCTCAAGCTG CTGATGAAGG AGTAG
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Protein sequence | MTDSIPPKGP DDAPNEGAGK PEALEVTQHA DHPLEAELRN PPASASAASA PAGGWEREVL EKVLMATVRE QRAARRWRIF FRFVALGLIG VLIYAFASLE GETVSTGRHT AIVTLEGEIA ANTNASAENI NASLQAAFAD DNTVGVILKI NSPGGSPVQA GMINDEIRRL RAKYKKIPLY VVVEEMCASG GYYVAAAADR IYVDKASIVG SIGVLMDGFG FTGLMDKVGV ERRLLTAGSN KGMLDPFSPV SPQQKQYAQE MLDQVHQQFI DVVKQGRGNR LKDDPTLFTG LFWTGAKAVD LGLADAIGSS DLVARSVIKA PDVVDYTVKE NFASRVARKL GTAMGAGAVK ALATTGQLKL LMKE
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